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研究生: 林文龍
Lin, Weng-long
論文名稱: 模擬稻米芽鞘胰蛋白酶抑制劑之活性結構研究
The Bioactivity Study of Mimetic Peptide Based on Rice Coleoptile Trypsin Inhibitor
指導教授: 黃福永
Huang, Fu-yung
學位類別: 碩士
Master
系所名稱: 理學院 - 化學系
Department of Chemistry
論文出版年: 2007
畢業學年度: 95
語文別: 中文
論文頁數: 104
中文關鍵詞: 胰凝乳蛋白酶胰蛋白酶抑制劑環狀抑制劑胰蛋白酶直鏈抑制劑抑制劑
外文關鍵詞: inhibitor, trypsin, trypsin inhibitor, linear inhibitor, cyclic inhibitor, chymotrypsin
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  • 摘要
    太陽花籽胰蛋白酶抑制劑﹙sunflower trypsin inhibitor;SFTI﹚為一種很穩定的抑制劑,由14個胺基酸組成之環狀結構,且具有一雙硫鍵結。為了探討具有雙硫鍵環狀小分子胜肽是否具有胰蛋白酶抑制劑的抑制效果,我們以實驗室所發現的稻米芽鞘胰蛋白酶抑制劑domain I去掉第八個位置的半胱胺酸﹙cysteine﹚具有33個胺基酸之片段,來探討抑制能力。使用簡單的氧化反應,讓整個結構利用雙硫鍵形成環狀,再去檢測抑制效果。測出其對胰蛋白酶﹙trypsin﹚,以L-BAPNA當受質的Ki值為7.97 x 10-7 M;而直鏈結構的抑制劑其Ki值為9.50 x 10-7 M;此兩種結構的抑制劑皆是競爭型抑制。而環狀抑制劑之抑制效果和稻米芽鞘胰蛋白酶抑制劑在相同條件下之Ki值4.00 x 10-7 M為減少約兩倍;而直鏈抑制劑和SFTI對β-trypsin抑制效果相比﹙Ki=5.00 x 10-8 M﹚,抑制效果減少約19倍。而環狀抑制劑其Ki比SFTI差的原因為環狀結構抑制劑其構造上有一個長鏈所致,使得抑制能力較不好。但我們發現環狀的抑制劑對胰凝乳蛋白酶﹙chymotrypsin﹚,BPVANA當受質,其Ki值為1.47 x 10-9 M,以直鏈的抑制劑在相同條件下,其Ki值為1.35 x 10-8 M,與環狀的抑制劑相比減少了約10倍,發現抑制劑結構,會影響對胰凝乳蛋白酶之抑制效果。測量的Ki值結果與文獻上指出改變不同受質時,大部分胰蛋白酶抑制劑對此酵素的Ki範圍相符合﹙10-8~10-10 M﹚,說明此環狀抑制劑對胰凝乳蛋白酶有好的抑制效果。
    從CD光譜發現,抑制劑直鏈結構α-helix的含量為2.4 %與環狀α-helix的含量3.0 %相比,變化沒有很大。而環狀結構在202 nm的位置有明顯的訊號,此為雙硫鍵所造成的訊號。此外,在210 nm的位置也有明顯的訊號,此為β-sheet的訊號,直鏈β-sheet的含量為54.44 %與環狀β-sheet的含量46.80 %。
    從紅外線光譜中,發現環狀結構特性鋒和胱胺酸﹙cystine﹚相似,可知道其結構中,有雙硫鍵的生成。且在指紋區470~700 cm-1處有看到些許雙硫鍵的stretching,這些都可以判斷出,結構中有雙硫鍵的鍵結。
    從拉曼光譜中,發現在1000 cm-1處有看到雙硫鍵之訊號,此處主要為使用633 nm波長激發時,胱胺酸所造成之雙硫鍵訊號,與文獻相符合。

    Abstract
    A 14 amino acid cyclic peptide with a disulfide bond protease inhibitor (SFTI) isolated from sunflower seeds showed a potential activity. It is thus interesting to explore the possibility for investigating small cyclic peptide having a disulfide bond as a potent protease inhibitor. We have isolated a protease inhibitor from rice coleoptiles with 133 amino acids, domain I of which has 33 amino acids. This peptide without the Cys7 was cyclized by a disulfide bond between Cys7 and Cys33, and was used as target for peptidomimetic study. It was found that the inhibitory activity in terms of Ki toward trypsin with L-BAPNA as substrate was 7.97 x 10-7 M and 9.50 x 10-7 M for disulfide bond cyclized peptide and non-cylized peptides, respectively.Both showed a competitive inhibitory behavior.The inhibitory constant (Ki) of this cyclo-target peptide was about twice of that for rice coleoptile protease inhibitor, Ki being 4.00 x 10-7 M and about 19 folds of that for SFTI, Ki being 5.00 x 10-8 M.Interestingly, it was found that the disulfide bond cyclized peptide and non-cyclized peptide showed a promising activity with Ki of 1.47 x 10-9 M and of 1.35 x 10-8, respectively, toward -chymotrypsin, which is competitive with the reported Ki value between 10-8 to 10-10 M,for various protease inhibitor toward -chymotrypsin, indicating this disulfide bond cyclized peptide showed a promising activity toward -chymotrypsin.
    Circular Dichroism spectroscopic studies showed that the content of -helix for cyclo- and noncyclo-peptide were 2.4% and 3.0%, respective; whileas, the content of -sheet were 46.8% and 54.4%, respectively. The disulfide bond was characterized by Circular Dichroism showing a signal at 202 nm and by IR spectroscopy showing a disulfide bond stretching finger print absorption between 470 to 700 cm-1.

    目錄 中文摘要………………………………………………………………….I 英文摘要………………………………………………………………..III 致謝……………………………………………………………………..IV 目錄…………………………………………………………...………....V 表目錄………………………………………………………………...VIII 圖目錄………………………………………………………………... ..IX 第一章 序論 一、模擬肽學…………………………………………………………......1 二、胰蛋白酶﹙Trypsin﹚………………………………………..………2 三、α-胰凝乳蛋白酶﹙α-Chymotrypsin﹚.………………………………4 四、胰蛋白酶抑制劑﹙Trypsin inhibitor﹚……………………..………6 五、Bowman-Birk型抑制劑……………...………………………….....9 六、抑制劑對酵素活性的影響………...………………………………...9 ﹙一﹚不可逆的抑制作用……………………………………………10 ﹙二﹚可逆的抑制作用………………………………………………12 a、競爭型抑制﹙Competitive﹚……………………………….12 b、非競爭形抑制﹙Non-Competitive﹚……………………...14 c、不競爭型抑制﹙Uncompetitive﹚………………………….14 七、Michaelis-Menten Equation………………………………………...16 八、抑制劑的比較………………………………………………………20 ﹙一﹚太陽花籽胰蛋白酶抑制劑……………………………………20 ﹙二﹚稻米芽鞘胰蛋白酶抑制劑……………………………………22 ﹙三﹚大蛋胰蛋白酶抑制劑…………………………………………22 九、胰蛋白酶抑制劑的應用……………………………………………23 十、合成雙硫鍵…………………………………………………………24 十一、質譜儀﹙Mass Spectrometer﹚…………………………………..27 十二、圓二色光譜﹙Circular Dichroism Spectrum﹚………………….30 十三、振動光譜介紹……………………………………………………32 十四、研究動機…………………………………………………………36 第二章 實驗 一、儀器…………………………………………………………………38 二、藥品…………………………………………………………………40 三、環狀胜肽之合成步驟………………………………………………42 四、環狀胜肽之純化……………………………………………………45 五、質譜儀﹙Mass Spectrometry﹚的測量……………………………..46 六、酵素與抑制劑的活性測試…………………………………………46 ﹙一﹚抑制類型測試…………………………………………………48 ﹙二﹚活性條件測試…………………………………………………50 七、圓二色光譜﹙Circular Dichosim﹚的測量﹙Far-UV﹚………………50 ﹙一﹚抑制劑二級結構測試…………………………………………51 ﹙二﹚抑制劑對胰蛋白酶二級結構測試……………………………52 八、紅外光譜﹙Infrared Absorption Spectrum﹚……………………….52 九、拉曼光譜﹙Raman Spectroscopy﹚………………………………..53 第三章 結果與討論 一、蛋白質的合成………………………………………………………57 二、酵素活性……………………………………………………………58 三、圓二色光譜﹙Far-UV﹚…………………………………………..64 四、紅外光譜﹙IR﹚……………………………………………………66 五、拉曼光譜﹙Raman﹚……………………………………....……….66 六、結論…………………………………………………………………67 參考文獻………………………………………………………………101

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