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研究生: 劉道生
Liu, Tao-Shen
論文名稱: 探討棘阿米巴雙硫鍵異構酶蛋白於抗藥機制中的角色
The role of disulfideisomerase domain containing protein in the drug tolerance mechanism of Acanthamoeba
指導教授: 林威辰
Lin, Wei-Chen
學位類別: 碩士
Master
系所名稱: 醫學院 - 微生物及免疫學研究所
Department of Microbiology & Immunology
論文出版年: 2015
畢業學年度: 103
語文別: 中文
論文頁數: 53
中文關鍵詞: 棘阿米巴棘阿米巴角膜炎聚六亞甲基雙胍雙硫鍵異構酶蛋白
外文關鍵詞: Acanthamoeba, Acanthamoeba keratitis, PHMB, disulfideisomerase domain containing protein
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  • 棘阿米巴角膜炎是一種由致病性棘阿米巴經由角膜損傷處感染角膜的眼部疾病。由於缺乏專一性藥物的發展,臨床上對於原蟲感染多半使用廣效性抗生素或消毒劑。聚六亞甲基雙胍 (Polyhexamethylene biguanide, PHMB) 是一種廣效性殺菌劑,為目前治療棘阿米巴角膜炎臨床用藥,但抗藥性蟲株的出現使得此類疾病並非每次都能夠順利治癒,因此針對其抗藥性機制研究,進而開發專一性藥物勢必為重要之議題。本研究結果顯示,抗性較強之本土臨床分離株NCKH_D在施予PHMB後,其雙硫鍵異構酶蛋白 (disulfideisomerase domain containing protein, PDI) 基因四個同分異構物中的ACA1_189420表現量會大幅提升。經由序列分析及分子生物學實驗,我們證明PDI的功能如同其他生物中的硫氧還蛋白 (Thioredoxin, Trx),在表現量提升時能影響棘阿米巴核糖核苷酸還原酶 (Ribonucleotide reductase, RNR) 的表現,進而干擾DNA複製使得細胞週期停滯。最重要的是,在抗藥性蟲株的PDI表現受抑制時,PHMB的毒殺效果確實有明顯的提升。總結以上結果,本論文證實PDI在棘阿米巴之抗藥機制中的重要性,並進一步釐清PDI於棘阿米巴中相關的訊息傳導路徑。

    In this study, we found that disulfideisomerase domain containing protein (PDI) ACA1_189420 is up-regulated by PHMB treatment in Acanthamoeba castellanii NCKH_D, a highly PHMB-tolerant strain. Furthermore, PDI affects the expression level of Ribonucleotide reductase (RNR) and DNA replication in Acanthamoeba as the role of Thioredoxin (Trx) in mammalian cell. NCKH_D was vulnerable to PHMB after PDI-specific siRNA silencing, which proved the relationship between PDI and drug tolerance. These results show that PDI is an important gene for drug tolerance ability in PHMB-tolerant Acanthamoeba. In addition, we also revealed the PDI signaling transduction in Acanthamoeba.

    目錄 中文摘要……………………………………………………………………………….I 英文摘要………………………………………...……………………………………II 誌謝……………………………………………………………………...……………V 目錄…………………………………………………………………………………VII 表目錄………………………………………………………………………………...X 圖目錄………………………………………………………………………………..XI 參考圖表目錄………………………………………………………………………XII 第一章 緒論……………………………………………………………..……………1  1.1 棘阿米巴生活史……………………………………………………….………2  1.2 棘阿米巴轉型………………………………………………………………….2  1.3 棘阿米巴角膜炎……………………………………………………………….3  1.4 棘阿米巴角膜炎的診斷……………………………………………………….4  1.5 棘阿米巴角膜炎治療………………………………………………………….4  1.6 聚六亞甲基雙胍鹽酸鹽 (Polyhexamethylene biguanide, PHMB) …………..5  1.7 PDI (Protein disulfide isomerase) ……………………………………………...6  1.8 SAHA (Suberoylanilide hydroxamic acid) ……………………………………..7  1.9 總結…………………………………………………………………………….8 第二章 實驗設計……………………………………………………………………..9 第三章 材料與方法…………………………………………………………………10  3.1棘阿米巴生長培養基Peptone-yeast extract-glucose (PYG) 配製………….10 3.2 棘阿米巴培養用緩衝液Page’s modified Neff’s amoeba saline (PAS) 配 製……………………………………………………………………………..10  3.3 棘阿米巴培養………………………………………………………………...10 3.3.1棘阿米巴解凍及保存…………………………………………………….10 3.3.2棘阿米巴繼代培養……………………………………………………….11  3.4 RNA萃取……………………………………………………………………...11  3.5 Genomic DNA萃取…………………………………………………………...12 3.5.1 DNA extraction buffer配製………………………………………………12 3.5.2 Genomic DNA萃取實驗步驟……………………………………………12  3.6 聚合酶連鎖反應 (PCR) ……………………………………………………..13 3.6.1 PCR 反應步驟…………………………………………………………...13 3.6.2 PCR 核酸產物電泳……………………………………………………...13  3.7反轉錄聚合酶連鎖反應 (RT-PCR) ………………………………………….14 3.7.1 cDNA合成………………………………………………………………..14 3.7.2 RT-PCR 反應步驟………………………………………………………..14 3.7.3 RT-PCR 核酸產物電泳…………………………………………………..15  3.8 棘阿米巴siRNA silencing……………………………………………………15  3.9 棘阿米巴SAHA處理………………………………………………………..15  3.10 棘阿米巴PHMB處理後生存曲線…………………………………………15  3.11 棘阿米巴加熱處理後生存曲線…………………………………………….16  3.12 棘阿米巴雙氧水耐受度測試……………………………………………….16  3.13 棘阿米巴細胞週期分析 (PI stain) ………………………………………...16 第四章 結果…………………………………………………………………………18  4.1 棘阿米巴PDI…………………………………………………………………18 4.1.1 抗藥性棘阿米巴PDI ACA1_189420表現量於PHMB處理過後上 升..………………………………………………………………………..18 4.1.2 棘阿米巴PDI於各臨床株中的基因長度分析…………………………19  4.2 藥物處理過後Thioredoxin訊息傳遞相關基因表現量…………………….19 4.2.1 棘阿米巴RNR表現量於PHMB處理過後下降………………………19 4.2.2 棘阿米巴TrxR表現量於PHMB處理過後不變………………………20 4.2.3 藥物處理過後棘阿米巴細胞週期變化…………………………………20  4.3 PDI對於棘阿米巴對抗PHMB是重要的…………………………………...20 4.3.1 以siRNA抑制棘阿米巴PDI表現……………………………………..20 4.3.2 抑制PDI後的棘阿米巴對於PHMB之生存率………………………..21 4.3.3 以SAHA抑制棘阿米巴PDI表現……………………………………...21 4.3.4 SAHA處理後的棘阿米巴對於PHMB之生存率………………………21  4.4 PDI並非廣泛性壓力蛋白…………………………………………………….22 4.4.1 棘阿米巴PDI於40℃之表現量下降…………………………………...22 4.4.2 棘阿米巴於40℃之生存率……………………………………………...23 4.4.3 棘阿米巴PDI於雙氧水處理後之表現不變……………………………23 4.4.4 棘阿米巴於雙氧水處理後之型態改變…………………………………23 第五章 討論…………………………………………………………………………25 參考文獻……………………………………………………………………………..28 附錄 1 儀器與材料…………………………………………………………………48 附錄 2 參考圖表……………………………………………………………………52

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