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研究生: 王意婷
Wang, Yi-Ting
論文名稱: 下調腺嘌呤核苷二磷酸核糖化因子(ARF)活化蛋白對VEGF分泌和血管發育之影響
Effects of down-regulation of ADP-ribosylation factor (ARF) activators on VEGF secretion and vascular development
指導教授: 李純純
Li, Chun-Chun
學位類別: 碩士
Master
系所名稱: 生物科學與科技學院 - 生命科學系
Department of Life Sciences
論文出版年: 2018
畢業學年度: 106
語文別: 英文
論文頁數: 84
中文關鍵詞: 鳥糞嘌呤核苷酸交換蛋白腺嘌呤核苷二磷酸核糖化因子血管內皮生長因子血管新生斑馬魚
外文關鍵詞: BIG1, BIG2, ARF1, VEGF, angiogenesis, zebrafish
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  • 鳥糞嘌呤核苷酸交換蛋白BIG 1和BIG2 (Brefeldin A-inhibited guanine nucleotide-exchange protein)是腺嘌呤核苷二磷酸核糖化因子 (ARF) 的活化蛋白,而ARF是高基氏體 (Golgi) 與細胞膜之間囊泡形成以及囊泡運輸的關鍵調節因子。BIG1和BIG2會藉由其Sec7 domain將ARF上結合的GDP置換為GTP來活化ARF。血管新生是生長發育過程中正常而重要的過程;然而,它也是腫瘤從良性狀態轉變成惡性狀的基本步驟。血管新生中的化學刺激是由各種血管生成因子所進行,其中的血管內皮生長因子(vascular endothelial growth factor , VEGF)已被證明是血管生成中的主要生長因子。有文獻報導,VEGF-165在內質網與高基氏體之間的早期運輸需要ARF1進行調控,且使用布雷非德菌素A (brefeldin A)干擾ARF1之活化會抑制VEGF-165分泌。然而,是哪些鳥糞嘌呤核苷酸交換因子(guanine nucleotide exchange factors, GEFs)主要活化ARF1進而調節VEGF的分泌與血管發育目前尚未釐清。我們的研究目的是為了瞭解哪些GEFs是主要調控ARF1活性以介導VEGF分泌,進而影響血管發育。我們透過GST pull-down assay證實BIG1/2會影響ARF1的活性,也發現在下調BIG1/2表現的膠質母細胞瘤細胞(U251 cells)和人類臍靜脈內皮細胞(Human Umbilical Vein Endothelial Cells, HUVEC)中VEGF mRNA和蛋白質以及細胞外VEGF的表達顯著降低。為了確認BIGs的功能,我們利用管形成檢驗(tube formation assay)作為體外試驗模型並選擇斑馬魚作為體內試驗模型。下調BIGs 表現之HUVECs的管形成程度降低。利用morpholino下調arfgef2表現時,斑馬魚中血管母細胞(angioblast) 的遷移和體節間血管(intersegmental vessels, ISVs)的出芽生長受到影響。 同時,使用CRISPR / Cas9下調arfgef2基因的斑馬魚胚胎在外觀和血管發育方面皆有發現缺陷。綜合以上,我們的實驗結果顯示BIG1和BIG2可能參與在VEGF分泌中並調節血管生成。

    Brefeldin A-inhibited guanine nucleotide-exchange protein BIG1 and BIG2 are well known as activator of ADP-ribosylation factor (ARF), the crucial regulator of vesicle formation and traffic between Golgi and plasma membrane. BIG1 and BIG2 replace ARF-bound GDP with GTP by their Sec7 domain to activate ARF. Angiogenesis is a normal and vital process in growth and development; however, it is also a fundamental step in the transition of tumors from benign state to malignant one. The chemical stimulation of angiogenesis is performed by various angiogenic growth factors, especially vascular endothelial growth factor (VEGF). Recent research showed that early trafficking of VEGF-165 between the endoplasmic reticulum and the Golgi requires ARF1 and treatment cells with brefeldin A to interfere with ARF1 activation inhibited VEGF-165 secretion. However, it remains unknown which guanine nucleotide exchange factors (GEFs) participate in regulation of ARF1 activation to mediate VEGF secretion and then affect vascular development. In the present study, we first confirmed that knockdown of BIG1 and/or BIG2 by shRNA led to a reduction of ARF1 activation by GST pull-down assay. The amounts of VEGF secretion to extracellular medium, and the expression of VEGF mRNA and protein were significantly decreased in glioblastoma U251 cells and HUVECs that depletion of BIG1 and/or BIG2. To explore the possible role(s) of BIGs in angiogenesis, we used HUVEC tube formation assay as in vitro model and chose zebrafish as in vivo model. Capillary tubule formation in HUVECs were markedly inhibited when depletion of BIGs proteins. Angioblast migration and intersegmental vessels (ISVs) sprouting in zebrafish were impaired when arfgef2 was knockdowned by morpholino. Depletion arfgef2 by using CRISPR/Cas9, also caused zebrafish embryos have defects on phenotype and vascular development. Taken together, these data reveal that BIG1 and BIG2 may through regulation of VEGF expression and secretion to modulate angiogenesis.

    摘要 I ABSTRACT III 誌謝 V TABLE OF CONTENTS VII TABLE DIRECTORY X FIGURE DIRECTORY XI ABBREVIATION XII INTRODUCTION 1 1.1 Small GTP-binding proteins 1 1.2 ADP-ribosylation factors (ARFs) family 1 1.3 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 and 2 3 1.4 Angiogenesis 4 1.5 Vascular endothelial growth factor (VEGF) 4 1.6 The advantages of zebrafish as an animal modal 5 1.7 Vascular development in the Zebrafish 6 1.8 Research motivation 7 MATERIALS AND METHODS 9 2.1 in vitro assays 9 2.1.1 Cell culture 9 2.1.2 Transfection of small interfering RNA (siRNA) 9 2.1.3 RNA extraction 10 2.1.4 Reverse transcription-PCR (RT-PCR) 10 2.1.5 Quantitative real-time PCR (qPCR) 11 2.1.6 Preparation and purification of GST fusion proteins 11 2.1.7 ARF1-GTP pull-down assay 12 2.1.8 Protein extraction 13 2.1.9 Western blot 13 2.1.10 Enzyme-linked immunosorbent assay (ELISA) of VEGF Secretion 14 2.1.11 Tube formation assay 14 2.2 in vivo assay 14 2.2.1 Zebrafish strains, husbandry, breeding and embryos collection 14 2.2.2 RNA extraction and cDNA preparation 15 2.2.3 TA cloning 16 2.2.4 Transformation 16 2.2.5 Synthesis of digoxigenin (DIG)-labeled RNA probe 17 2.2.6 Whole mount in situ hybridization (WISH) 18 2.2.7 RNA synthesis 19 2.2.8 Guide RNA synthesis 20 2.2.9 Microinjection 21 2.2.10 Confocal imaging 22 2.2.11 T7E1 assay 22 RESULTS 23 3.1 Depletion of BIG1 or BIG2 in U251 cells by shRNA 23 3.2 Effects of BIG1 or BIG2 depletion on ARF1 activity in U251 cells 23 3.3 Effects of BIG1/BIG2 depletion on VEGF secretion in U251 cells 24 3.4 Effects of BIG1/BIG2 depletion on gene expression of angiogenic factors in U251 cells 24 3.5 Effects of BIG1 or BIG2 depletion on VEGF gene and protein expression in HUVECs 25 3.6 Effects of BIG1/BIG2 depletion on VEGF secretion in HUVECs 26 3.7 Effects of BIG1 and/or BIG2 depletion on HUVEC tube formation 26 3.8 Spatiotemporal expression of arfgef1 and arfgef2 mRNA during zebrafish development 26 3.9 Specificity and knockdown efficiency of arfgef2 spling morpholino in zebrafish 27 3.10 Effects of arfgef2 knockdown on angioblast migration during zebrafish development. 28 3.11 Effects of arfgef2 knockdown by arfgef2 spMO on zebrafish vascular development 29 3.12 Specificity and knockdown efficiency of arfgef2 ATG morpholino in zebrafish 30 3.13 Effects of arfgef2 knockdown by arfgef2 ATG-MO on zebrafish vascular development 30 3.14 Mutagenetic phenotype of CRISPR-Cas9-targeted arfgef2 zebrafish embryos 31 3.15 Mutagenesis of arfgef2 by CRISPR/Cas9 methods causes vascular defects 31 DISCUSSION 33 4.1 The role of ARF1 in VEGF secretion 33 4.2 BIG1/2 affects the expression of angiogenic factors or not 34 4.3 BIG1/2 affects angiogenesis by regulating ARF1 34 4.4 The role of BIG2 in vascular development of zebrafish embryo 35 4.5 Conclusion 35 REFERENCE 37 TABLES 42 FIGURES 46 APPENDICES 71

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