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研究生: 程靖雯
Chen, Jing-Wen
論文名稱: 銅離子引發綠色螢光蛋白發光團類似物之環化反應: 反應機制的探討
Copper-ion-induced Cyclization Reaction of Green Fluorescent Protein Chromophore Derivatives: Discussion on Reaction Mechanism
指導教授: 宋光生
Sung, Kuang-Sen
學位類別: 碩士
Master
系所名稱: 理學院 - 化學系
Department of Chemistry
論文出版年: 2025
畢業學年度: 113
語文別: 中文
論文頁數: 92
中文關鍵詞: 銅離子(Ⅱ)環化反應反應機制
外文關鍵詞: copper(II), cyclization, mechanism
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  • 在過去的研究中,黃世昱學長嘗試使用o-ABDI的衍生物o-DHPBDI與銅(II)試劑進行螯合反應意外得到環化產物DHPIO,當時並未對其真正之反應機制深入探討。也發現到相較起始物o-DHPBDI其螢光量子產率也有提升。
    本文中原先將針對此o-DHPBDI環合反應的機制深入探討,藉由加入自由基捕捉劑TEMPO觀察到能夠阻斷2種環化產物生成,通過再結晶的方式得產物HMTA其真實結構,推測此環合反應確實經過自由基路徑,然而從原先環化產物結構DHPIO、DHPIO-Cl發現與HMTA存在明顯的不同,推測TEMPO可能作為氧化劑開啟另一條新的環化路徑,而HMTA為主產物產率最高達70.5%,解決了原先o-DHPBDI環合反應存在大量副產物DHPIO-Cl。
    最後在電子吸收及螢光放射光譜觀察到因為HMTA結構更具剛性相較於o-DHPBDI產生明顯藍移的現象,也因為旋轉及振動自由度皆明顯下降,其螢光量子產率也比原先環化產物DHPIO、DHPIO-Cl增加了10倍之多。

    In previous research, Huang Shiyu tried to use o-DHPBDI and copper (II) reagent for chelation reaction and accidentally obtained cyclization product DHPIO. At that time, the actual reaction mechanism was not deeply explored. It was also found that the fluorescence quantum yield was also improved compared with the starting material o-DHPBDI.
    In this paper, the reaction mechanism of this cyclization reaction was originally studied in depth. By adding the free radical scavenger TEMPO, it was observed that the formation of two cyclization products could be blocked. It was speculated that this cyclization reaction did go through the free radical pathway. However, the original cyclization product structures DHPIO and DHPIO-Cl were found to be significantly different from HMTA. TEMPO may act as an oxidant to start another new cyclization reaction. The yield of HMTA as the main product is as high as 70.5%, which solves the problem of the original o-DHPBDI cyclization reaction with a large amount of by-product DHPIO-Cl.
    Finally, in the electronic absorption and fluorescence emission spectra, it was observed that HMTA had a more rigid structure than o-DHPBDI and produced a significant blue shift. Also, because the rotational and vibrational freedoms were significantly reduced, its fluorescence quantum yield is also 10 times higher than that of the original cyclization products DHPIO and DHPIO-Cl.

    中文摘要 i 英文摘要延伸 ii 致謝 xxi 目錄 xxii 表目錄 xxvi 圖目錄 xxvii 第I部分 序論 1 I-1 綠色螢光蛋白發光團的發展 1 I-2 提高綠色螢光蛋白發光團其螢光量子產率的方法 2 I-3 TEMPO在有機合成上扮演的角色[9] 4 I-3-1 溫和的催化劑 4 I-3-2 自由基捕捉劑 6 I-3-3 自由基捕捉劑同時也是氧化劑 7 I-4 銅離子在有機反應中之應用 8 I-4-1 銅離子引發之環化反應與其機制 9 I-4-2 銅離子引發o-DHPBDI衍生物環化反應[2] 11 I-5 銅離子引發環化反應涉及C=N鍵之加成過程 12 I-6 實驗動機 15 第II部分 結果與討論 16 II-1 綠色螢光蛋白衍生物o-DHPBDI環化反應的機制探討 16 II-1-1 新環化產物HMTA的發現過程 16 II-2 不同反應條件對O-DHPBDI新環化反應結果的探討 19 II-2-1 銅離子是否參與C=N鍵之加成 19 II-2-2 改變TEMPO試劑的反應劑量與在氮氣及氧氣下的反應情形 22 II-3 綠色螢光蛋白衍生物o-DHPBDI新環化反應機制推測 24 II-4 o-DHPBDI新環化反應之起始物o-DHPBDI與環化產物HMTA的光譜性質比較 27 II-5 結論 31 第III部分 實驗儀器及實驗方法 33 III-1 實驗儀器 33 III-1-1 核磁共振光譜儀(Nuclear Magnetic Resonance Spectrometer) 33 III-1-2 高解析質譜儀(High Resolution Mass Spectrometry, ESI-MS) 33 III-1-3 紫外-可見光光譜儀(UV-Vis Spectrometry, PerkinElmer) 33 III-1-4 螢光放射光譜儀(Fluorescence Spectrometer, PerkinElmer, LS 45) 34 III-1-5 單晶X-光繞射儀(Single-Crystal X-Ray Diffractometer) 34 III-2 綠色螢光蛋白衍生物的合成 35 III-2-1 合成o-DHPBDI五步驟 35 III-2-2 第六步合成HMTA及單晶培養 39 III-3 環化產物HMTA基本物理性質的測定 41 III-3-1 吸收光譜的測定及莫爾吸收係數的計算 41 III-3-2 螢光光譜測定 41 III-3-3 標準液校正以及計算螢光量子產率[22] 41 III-3-4螢光量子產率的計算 42 第IV部分 參考文獻 43 第V部分 附錄 46 V-1 GFP衍生物NMR圖譜 46 V-1-1 (Z)-2-methyl-4-(2-nitrobenzylidene)oxazol-5(4H)-one之1H NMR 46 V-1-2 (Z)-2-acetamido-N-methyl-3-(2-nitrophenyl)acrylamide之1H NMR 47 V-1-3 (Z)-2,3-dimethyl-5-(2-nitrobenzylidene)-3,5-dihydro-4H-imidazol-4-one之1H NMR 48 V-1-4 (Z)-5-(2-aminobenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one (o-ABDI) 之1H NMR 49 V-1-5 (Z)-5-(2-((2,3-dihydroxypropyl)amino)benzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one (o-DHPBDI) 之1H NMR 50 V-1-6 5-hydroxy-2-methyl-2a-(((2,2,6,6-tetramethylpiperidin-1-yl)oxy)methyl)-2,2a,4,5,5a,6-hexahydro-1H-3-oxa-2,2a1,6-triazadibenzo[cd,g]azulen-1-one (HMTA) 之1H NMR 51 V-1-7 5-hydroxy-2-methyl-2a-(((2,2,6,6-tetramethylpiperidin-1-yl)oxy)methyl)-2,2a,4,5,5a,6-hexahydro-1H-3-oxa-2,2a1,6-triazadibenzo[cd,g]azulen-1-one (HMTA) 之 13C NMR 52 V-2 GFP衍生物質譜 ESI(+)MS 53 V-2-1 5-hydroxy-2-methyl-2a-(((2,2,6,6-tetramethylpiperidin-1-yl)oxy)methyl)-2,2a,4,5,5a,6-hexahydro-1H-3-oxa-2,2a1,6-triazadibenzo[cd,g]azulen-1-one (HMTA) 53 V-3 GFP衍生物單晶數據 54 V-3-1 5-hydroxy-2-methyl-2a-(((2,2,6,6-tetramethylpiperidin-1-yl)oxy)methyl)-2,2a,4,5,5a,6-hexahydro-1H-3-oxa-2,2a1,6-triazadibenzo[cd,g]azulen-1-one (HMTA) 54

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