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研究生: 周亞憶
Chou, Ya-Yi
論文名稱: RNA轉甲基酶NSUN2介導胰腺癌進程中的細胞極性之調控
NOP2/Sun RNA Methyltransferase 2 Mediates Cellular Polarity in Pancreatic Cancer Progression
指導教授: 黃柏憲
Huang, Po-Hsien
學位類別: 碩士
Master
系所名稱: 醫學院 - 生物化學暨分子生物學研究所
Department of Biochemistry and Molecular Biology
論文出版年: 2021
畢業學年度: 109
語文別: 英文
論文頁數: 55
中文關鍵詞: 胰腺癌 、NSUN2轉甲基酶 、RNA甲基化修飾 、細胞極性 、細胞增生
外文關鍵詞: Pancreatic cancer, NSUN2, 5-methylcytosine, Cellular polarity, Cell proliferation
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  • 胰腺癌是世界上最致命的惡性腫瘤之一,其五年存活率僅有9%。在導管上皮細胞中細胞極性具有維持胰腺的組織結構的功能,然而細胞極性通常在分化不良的癌化上皮細胞中會被消除。NOP2/Sun RNA methyltransferase 2(NSUN2)為一種甲基轉移酶,能在RNA的胞嘧啶上進行甲基化修飾,並發現其在一些癌細胞中會上調,以促進細胞增生和侵襲。由於NSUN2在胰腺癌中的作用機制尚不清楚,了解其調節胰腺腫瘤中細胞分化的機制是很重要。在本研究中,我們假設NSUN2可能調節胰腺癌進程中的細胞極性和上皮分化。首先,我們通過qPCR確定NSUN2是否可以調節細胞極性基因的表現。此外,我們通過免疫組織化學染色測定胰腺癌切片中NSUN2和CK19的蛋白表達量,檢體包括胰腺癌病程前期KrasG12D / +;Pdx1-Cre(KC)小鼠以及早期和晚期的KrasG12D / +,Trp53fl / fl;Pdx1-Cre(KPC)小鼠。我們的數據顯示,NSUN2在晚期KPC小鼠胰腺上皮內癌變(PanIN)的表達量上升。最後,為了確認NSUN2表達是否可能促進體內腫瘤進程,我們使用控制組和NSUN2敲低的胰臟癌細胞進行皮下注射以比較兩者腫瘤生長的差異。皮下注射的腫瘤切片在敲低NSUN2基因組中顯示出分化較良好的組織結構。總結而論,我們的結果表示NSUN2可能在胰腺癌發展過程中扮演失調上皮分化的角色。

    Pancreatic cancer is one of the deadliest malignant tumors worldwide with a five-year survival rate of only 9%. Cellular polarity of ductal epithelial cells, which functions to maintain the tissue architecture of the pancreas, is often abolished in poorly-differentiated cancer cells. NOP2/Sun RNA methyltransferase 2 (NSUN2) catalyzes the deposition of methyl moiety onto cytosines in RNA and it is upregulated in several cancer types to promote cell proliferation and invasion. The role of NSUN2 in pancreatic cancer remains unclear, it is important to understand its mechanism that regulates cellular differentiation in pancreatic tumorigenesis. Firstly, we determined the protein expression level of NSUN2 and CK19 by immunohistochemistry in a set of pancreatic sections, including those of precancerous KrasG12D/+;Pdx1-Cre (KC) mice and the early and the late stages of KrasG12D/+;Trp53fl/fl;Pdx1-Cre (KPC) mice. Our data showed an increase NSUN2 expression in pancreatic intraepithelial neoplasia (PanIN) and PDAC in late-stage KPC mice. Further, we determined NSUN2 could regulate the expression of cellular polarity genes by qPCR and western blot. Finally, to examine whether NSUN2 expression promotes tumor progression in vivo, subcutaneous implantation model using the control and the NSUN2 knockdown cancer cells were conducted for comparing differences of tumor growth. Tumoral sections of the resulting grafts showed properly differentiated tissue structure in the NSUN2 knockdown group. In summary, our data support that NSUN2 plays a role in the dysregulation of epithelial differentiation during pancreatic cancer development.

    摘要 I Abstract II Acknowledgments III Content IV Introduction 1 1. Pancreatic cancer 1 2. DNA/RNA modification 2 3. m5C methyltransferases 3 4. NOP2/Sun RNA Methyltransferase 2 4 5. Cellular polarity 5 Rational and Hypothesis 7 Specific Aims 8 Aim 1. To clarify NSUN2 localization and expression in pancreatic cancer in vivo. 8 Aim 2. To investigate the association of NSUN2 with cellular polarity in pancreatic cancer cells. 8 Aim 3. To clarify whether NSUN2 modulates tumor progression in vivo. 8 Aim 4. To examine the differentiated tissue structure and cancer progression in tumoral sections of the subcutaneous implantation model. 8 Materials and Methods 9 1. Cell culture 9 2. Lentivirus transduction 9 3. RNA isolation and reverse transcription 10 4. Quantitative real-time PCR (qPCR) 10 5. Protein extraction 11 6. Western blot 11 7. Three-dimensional (3D) cell culture 12 8. Mouse model 12 9. Tumor subcutaneous implantation 13 10. Immunohistochemistry 13 11. Cell proliferation assay 14 12. Image analysis and Statistics 14 Results 15 Aim 1. To clarify NSUN2 localization and expression in pancreatic cancer in vivo. 15 1-1. NSUN2 protein expression during pancreatic cancer progression in KC and KPC mouse model. 15 1-2. To establish the stable NSUN2 knockdown of pancreatic cancer cell lines. 15 Aim 2. To investigate the association of NSUN2 with cellular polarity in pancreatic cancer cells. 16 2-1. To evaluate NSUN2-mediated regulation of cellular polarity from TCGA pancreatic adenocarcinoma data. 16 2-2. To assess whether cellular polarity genes are regulated by NSUN2 in pancreatic cancer cells. 16 Aim 3. To clarify whether NSUN2 modulates tumor progression in vivo. 17 3-1. The functional analysis of NSUN2 in mouse pancreatic cancer cell lines. 17 3-2. NSUN2-mediated tumor growth ability between 3D culture and subcutaneous implantation model. 18 Aim 4. To examine the differentiated tissue structure and cancer progression in tumoral sections of the subcutaneous implantation model. 18 4-1. To establish subcutaneous implantation model of empty and NSUN2 knockdown clones. 18 4-2. To validate the cancer proliferation capacity and the regulation of cellular polarity in tumoral sections. 19 4-3. To characterize the NSUN2-mediated tissue structure differentiation and tumor microenvironment in the resulting grafts. 19 Discussion 21 Conclusion 24 References 25 Figures 36 Figure 1. High expression of NSUN2 in the late stage of pancreatic cancers in vivo. 37 Figure 2. Knockdown efficiency of NSUN2 in human pancreatic cancer cell lines. 39 Figure 3. Cellular polarity genes were regulated by NSUN2 between TCGA database and pancreatic cancer cells. 41 Figure 4. SCRIB is slightly regulated by NSUN2 knockdown in human and mouse pancreatic cancer cells. 42 Figure 5. shRNA knockdown efficiency of Nsun2 in mouse primary cells and cell functional analysis. 44 Figure 6. NSUN2 promoted the tumorigenesis of pancreatic cancer in vivo. 46 Figure 7. Expression of SOX9-positive cells was decreased in NSUN2 knockdown group. 47 Figure 8. Expression of proliferation and polarity marker in SC graft of WT mice with empty and NSUN2 knockdown cells. 49 Figure 9. Expression of CD4-positive cells was similar upon NSUN2 knockdown. 51 Figure 10. Tumoral sections of NSUN2 knockdown cells have reduced stromal myofibroblasts. 52 Tables 53 Table 1. shRNA plasmid and target sequences 53 Table 2. Condition of lentivirus transduction 53 Table 3. Primer sequences 54 Table 4. Antibody list 55

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