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研究生: 葉芸
Yeh, Yun
論文名稱: 以質譜技術為基礎之非標的代謝體分析找尋魚儲藏期間之新鮮度化學指標
Discovery of chemical markers for fish freshness during storage using mass spectrometry-based untargeted metabolomics analysis
指導教授: 廖寶琦
Liao, Pao-Chi
學位類別: 碩士
Master
系所名稱: 醫學院 - 食品安全衛生暨風險管理研究所
Department of Food Safety / Hygiene and Risk Management
論文出版年: 2020
畢業學年度: 108
語文別: 英文
論文頁數: 41
中文關鍵詞: 新鮮度指標代謝體學非標的分析
外文關鍵詞: fish, freshness markers, metabolomics, untargeted analysis
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  • 攝入腐敗或受污染的食品可能會對公眾健康造成潛在危害,故評估食品是否腐敗對於消費者而言至關重要。魚極為容易腐敗,且在製造過程中很容易失去魚本身的形態特徵,使得消費者無法輕易透過感官方法評估其腐敗程度,構成一個潛在的食品安全問題。非標的代謝體學是探討食品安全和品質的新領域,為食品儲存過程的理解提供了新的視野。本研究的目的為利用以質譜技術為基礎之非標的代謝體分析找尋魚儲藏期間之新鮮度化學指標。為了找尋具有再現性的潛在新鮮度指標,在4℃下進行了三次將魚儲存0, 24, 48, 72小時各六重複的實驗(n = 4×6)。在三組質譜數據中交集的訊號共有115個。115個訊號已利用曼-惠特尼U檢定(the Mann Whitney U test)確認其在0小時與72小時的組別間具有顯著差異(α = 0.005)。利用精確質量與二次質譜數據進一步鑑定和闡明潛在新鮮度指標的化學結構。在115個訊號中,鑑定出8個潛在新鮮度指標,包括尿嘧啶,次黃嘌呤,肌苷,醯基肉鹼(10:0),α-次亞麻油酸,二十二碳六烯酸,花生四烯酸以及亞麻油酸。經過斯皮爾曼等級相關係數(the Spearman's rank correlation coefficient)評估後,8個潛在新鮮度指標的趨勢在72小時內保持一致,證實此方法學作為品質保證潛在工具之有效性。

    The consumption of spoiled or contaminated food may pose potential harm to public health. Therefore, it is essential for consumers to assess the presence of food freshness in perishable foods. Fish is extremely perishable, and morphological characteristics of fish are easily lost during manufacturing processes, making the freshness challenging to assess via sensory methodologies and therefore posing a potential food safety issue. Untargeted metabolomics, the new frontier in food safety and quality research, has given rise to extraordinary opportunities for increasing our understanding of the process in food storage. The specific aim of this study is to discover chemical markers for fish freshness during storage using mass spectrometry-based untargeted metabolomics analysis. To discover the potential freshness markers with reproducibility, the fish storage experiments for 0, 24, 48, 72 hours in sextuplicate (n = 4 × 6) at 4 ℃ were conducted three times. A total of 115 features were intersected from 3 batches of experiments, and they showed differences between the fish samples with storage 0 and 72 hour(s) by the Mann Whitney U test (α = 0.005). Chemical structures of freshness marker candidates were further elucidated using accurate mass and MS/MS spectrum. Among 115 candidates, 8 potential freshness markers have been identified, including uracil, hypoxanthine, inosine, acylcarnitine 10:0, α-linolenic acid, docosahexaenoic acid, arachidonic acid, and linoleic acid. After the evaluation of the Spearman's rank correlation coefficient, the trends of identified potential freshness markers were consistent in 72 hours, verifying the effectiveness of the methodology as a potential tool for quality assurance.

    Content 摘要 II Abstract III 誌謝 IV List of Tables VII List of Figures VIII Abbreviations IX Chapter 1. Introduction 1 1.1. Food safety issues caused by contaminated food 1 1.2. Perishability of fish and fish products 1 1.3. General quality indicators for fish products freshness assessment 3 1.4. Applications of metabolomics analysis in food 4 Chapter 2. Objective 6 Chapter 3. Materials and methods 7 3.1. Chemicals and reagents 7 3.2. Experimental section 7 3.2.1. Sample pretreatment 7 3.2.2. UHPLC-HRMS analysis 9 3.3. Metabolomics-based data processing 10 3.4. Identification of the chemical structures 12 Chapter 4. Result and discussion 13 4.1. The metabolomics-based strategy for fish freshness marker discovery 13 4.2. Discovery of freshness marker candidates 15 4.3. Identification of freshness marker candidates 16 4.4. Verification of potential freshness markers 22 4.5. Exploration of the reasons that influence the tendencies of identified freshness markers 25 4.5.1. Nucleotide-related degradation products 25 4.5.2. Acylcarnitine 26 4.5.3. Omega-3 and omega-6 fatty acids 28 Chapter 5. Conclusion 29 References 30 Appendix 34 Appendix 1 The sample injection order in triplicate experiments 34 Appendix 2 Distributions of fold-change in 3 batches of experiments 37 Appendix 3 115 features with the significance level at α = 0.005 were intersected from 3 batches of experiments 38

    Belitz H-D, Grosch W, Schieberle P. 2009. Fish, whales, crustaceans, mollusks. In: Food chem, 617-639.
    Blackburn CdW. 2006. Food spoilage microorganisms:Woodhead Publishing.
    Cléach J, Pasdois P, Marchetti P, Watier D, Duflos G, Goffier E, et al. 2019. Mitochondrial activity as an indicator of fish freshness. Food Chemistry 287:38-45.
    Dilbaghi N, Sharma S. 2007. Food spoilage, food infections and intoxications caused by microorganisms and methods for their detection.
    Dunn WB, Erban A, Weber RJM, Creek DJ, Brown M, Breitling R, et al. 2013. Mass appeal: Metabolite identification in mass spectrometry-focused untargeted metabolomics. Metabolomics 9:44-66.
    Ehira S. 1987. Determination of fish freshness using the k value and comments on some other biochemical changes in relation to freshness. " Seafood Quality Determination":185-207.
    Erkmen O, Bozoglu TF. 2016. Spoilage of fish and other seafoods. In: Food microbiology: Principles into practice, 301-306.
    Fazial FF, Tan LL, Zubairi SI. 2018. Bienzymatic creatine biosensor based on reflectance measurement for real-time monitoring of fish freshness. Sens Actuator B-Chem 269:44-53.
    Hammond ST, Brown JH, Burger JR, Flanagan TR, Fristoe TS, Mercado-Silva N, et al. 2015. Food spoilage, storage, and transport: Implications for a sustainable future. Bioscience 65:758-768.
    Han F, Huang X, Mahunu GK. 2017. Exploratory review on safety of edible raw fish per the hazard factors and their detection methods. Trends Food Sci Technol 59:37-48.
    Hanna J. 1992. Rapid microbial methods and fresh fish quality assessment. Fish processing technology:275-305.
    Harpaz S. 2005. L-carnitine and its attributed functions in fish culture and nutrition—a review. Aquaculture 249:3-21.
    Hong H, Regenstein JM, Luo Y. 2017. The importance of atp-related compounds for the freshness and flavor of post-mortem fish and shellfish muscle: A review. Critical Reviews in Food Science and Nutrition 57:1787-1798.
    Hu C, Xu G. 2013. Mass-spectrometry-based metabolomics analysis for foodomics. TrAC, Trends Anal Chem 52:36-46.
    Janzen DH. 1977. Why fruits rot, seeds mold, and meat spoils. The American Naturalist 111:691-713.
    Jones PM, Bennett MJ. 2017. Chapter 4 - disorders of mitochondrial fatty acid β-oxidation. In: Biomarkers in inborn errors of metabolism, (Garg U, Smith LD, eds). San Diego:Elsevier, 87-101.
    Kim S, Kim J, Yun EJ, Kim KH. 2016. Food metabolomics: From farm to human. Curr Opin Biotechnol 37:16-23.
    Kuehn HH, Gunderson MF. 1962. Psychrophilic and mesophilic fungi in fruit-filled pastries. Appl Microbiol 10:354.
    Kykkidou S, Giatrakou V, Papavergou A, Kontominas MG, Savvaidis IN. 2009. Effect of thyme essential oil and packaging treatments on fresh mediterranean swordfish fillets during storage at 4°c. Food Chem 115:169-175.
    Lee H, Kizito S, Weese S, Craig‐Schmidt M, Lee Y, Wei CI, et al. 2003. Analysis of headspace volatile and oxidized volatile compounds in dha‐enriched fish oil on accelerated oxidative storage. Journal of food science 68:2169-2177.
    Liu XJ, Locasale JW. 2017. Metabolomics: A primer. Trends Biochem Sci 42:274-284.
    Mendes R, Quinta R, Nunes ML. 2001. Changes in baseline levels of nucleotides during ice storage of fish and crustaceans from the portuguese coast. European Food Research and Technology 212:141-146.
    Molognoni L, Daguer H, Ploencio LAD, Lindner JD. 2018. A multi-purpose tool for food inspection: Simultaneous determination of various classes of preservatives and biogenic amines in meat and fish products by lc-ms. Talanta 178:1053-1066.
    Olatunde OO, Benjakul S. 2018. Nonthermal processes for shelf-life extension of seafoods: A revisit. Compr Rev Food Sci Food Saf 17:892-904.
    Pitt JI, Hocking AD. 2009. The ecology of fungal food spoilage. In: Fungi and food spoilage:Springer, 3-9.
    Rahman UU, Sahar A, Pasha I, Rahman SU, Sohaib M, Ishaq A, et al. 2016. Augmenting quality and microbial safety of broiler meat at refrigeration storage by applying chemical interventions. J Food Process Preserv 41:e13030.
    Rubert J, Zachariasova M, Hajslova J. 2015. Advances in high-resolution mass spectrometry based on metabolomics studies for food – a review. Food Additives & Contaminants: Part A 32:1685-1708.
    Saito T, Arai KI, Matsuyoshi M. 1959. A new method for estimating the freshness of fish. Nippon Suisan Gakkaishi (Japanese Edition) 24:749-750.
    Schrimpe-Rutledge AC, Codreanu SG, Sherrod SD, McLean JA. 2016. Untargeted metabolomics strategies—challenges and emerging directions. Journal of the American Society for Mass Spectrometry 27:1897-1905.
    Semeano ATS, Maffei DF, Palma S, Li RWC, Franco B, Roque ACA, et al. 2018. Tilapia fish microbial spoilage monitored by a single optical gas sensor. Food Control 89:72-76.
    Shumilina E, Ciampa A, Capozzi F, Rustad T, Dikiy A. 2015. Nmr approach for monitoring post-mortem changes in atlantic salmon fillets stored at 0 and 4°c. Food Chemistry 184:12-22.
    Srirangsan P, Hamada-Sato N, Kawai K, Watanabe M, Suzuki T. 2010. Improvement of fish freshness determination method by the application of amorphous freeze-dried enzymes. J Agric Food Chem 58:12456-12461.
    Sullivan Ritter JC, Budge SM, Jovica F, Reid A-JM. 2015. Oxidation rates of triacylglycerol and ethyl ester fish oils. Journal of the American Oil Chemists' Society 92:561-569.
    Tsugawa H, Cajka T, Kind T, Ma Y, Higgins B, Ikeda K, et al. 2015. Ms-dial: Data-independent ms/ms deconvolution for comprehensive metabolome analysis. Nature Methods 12:523-526.
    World Health Organization. 2017. Food safety. Available: http://www.who.int/news-room/fact-sheets/detail/food-safety.
    Zhang H-Z, Lee T-C. 1997. Rapid near-infrared spectroscopic method for the determination of free fatty acid in fish and its application in fish quality assessment. J Agric Food Chem 45:3515-3521.
    Zhang Y, Qin N, Luo Y, Shen H. 2015. Changes in biogenic amines and atp-related compounds and their relation to other quality changes in common carp (cyprinus carpio var. Jian) stored at 20 and 0°. Journal of Food Protection 78:1699-1707.

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