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研究生: 施昶亘
Shih, Chang-Hsuan
論文名稱: 以萘環為骨架之綠色螢光蛋白衍生物之環化反應:合成、性質
Cyclization Reactions of Naphthalene-Based Green Fluorescent Protein Derivatives: Synthesis and Properties
指導教授: 宋光生
Sung, Kuang-Sen
學位類別: 碩士
Master
系所名稱: 理學院 - 化學系
Department of Chemistry
論文出版年: 2025
畢業學年度: 113
語文別: 中文
論文頁數: 135
中文關鍵詞: 銅離子環化反應共軛系統光譜紅移自由基中間體
外文關鍵詞: copper(II), cyclization, conjugated system, TEMPO
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  • 在本實驗室先前的實驗中,於以 Cu (II) 和 o-ABDI 衍生物進行結晶培養的過程中,意外地生成了環化產物 DHPIO。與其未環化前的前驅物相比,DHPIO 的吸收與螢光光譜皆出現藍移現象,且其分子結構更為剛性,不易扭轉,進而導致螢光量子產率的提升。
    根據文獻報導,引入共軛系統可導致光譜產生紅移。因此,本研究設計在分子結構中引入額外的共軛系統,期望能使環化產物的吸收與螢光光譜產生紅移,並進一步提升其螢光量子產率。於是本研究參考文獻及實驗室學長姐既有的合成路徑,成功合成出綠色螢光蛋白衍生物 o-CDHPNMI 及其環化產物 CDHPMIO。因分子結構中的共軛程度及結構鋼性的增加,觀察結果顯示,CDHPMIO 相較於其前驅物 o-CDHPNMI,呈現吸收與螢光光譜紅移的趨勢,且其螢光量子產率仍顯著提升,達到期望的實驗結果。此外,o-CDHPNMI 在短波長激發下,顯現出雙重螢光放射光譜,此現象可能源於激發態下分子結構的扭轉與否所造成之不同構型所致。
    並在環化反應條件中額外加入 TEMPO,意外合成出反應中間體 o-CDHPNMI-TEMPO,此一結果證實了環化機制中涉及自由基中間體的存在。

    In previous experiments conducted in our laboratory, an unexpected cyclized product, DHPIO, was obtained during crystallization of Cu (II) with o-ABDI derivatives. Compared to its non-cyclized precursor, DHPIO exhibited blue-shifted absorption and fluorescence spectra. Additionally, the increased molecular rigidity due to cyclization suppressed intramolecular rotation, resulting in a significant enhancement of the fluorescence quantum yield.
    According to literature reports, the introduction of extended conjugation systems can induce red-shifted optical spectra. Therefore, this study was designed to incorporate additional conjugated moieties into the molecular structure, with the aim of shifting the absorption and emission wavelengths of the cyclized products toward longer wavelengths, while also enhancing their fluorescence quantum yields. Based on previous literature and established synthetic protocols developed by former members of our research group, we successfully synthesized the green fluorescent protein (GFP) derivative o-CDHPNMI and its cyclized product CDHPMIO. Due to the increased molecular conjugation and structural rigidity, CDHPMIO exhibited a red-shift in both absorption and fluorescence spectra compared to its precursor o-CDHPNMI. Moreover, its fluorescence quantum yield was significantly enhanced, achieving the desired experimental outcome.
    By introducing TEMPO into the cyclization reaction conditions, the intermediate product o-CDHPNMI-TEMPO was unexpectedly isolated. This result provides clear evidence for the involvement of a radical intermediate in the proposed cyclization mechanism.

    碩士論文合格證明書 i 中文摘要 ii SUMMARY iii 誌謝 xxxviii 目錄 xxxix 表目錄 xliii 圖目錄 xliv 第I部分 序論 1 第I-1章、綠色螢光蛋白發光團 (p-HBDI) 的發現及後續應用 1 第I-2章、提高發光團p-HBDI及其衍生物螢光量子產率之相關文獻 4 第I-3章、改變發光團結構對吸收及放射波長的影響 6 第I-4章、銅離子在有機合成中的應用 7 I-4-1 銅離子所引發之環化反應 8 第I-4-3 綠色螢光蛋白o-ABDI衍生物之環化反應探討 10 第I-5章、2,2,6,6-Tetramethylpiperidine-1-oxyl (TEMPO)文獻回顧 12 I-5-1 TEMPO性質介紹及有機合成上應用 12 I-5-2 TEMPO和銅離子一同作用之有機合成反應 13 第I-6章、化學螢光感測器之光物理機制探討 16 I-6-1 扭曲分子內電荷轉移(TICT, Twisted Intramolecular Charge Transfer) 16 第I-7章、實驗動機 19 第II部分 結果與討論 20 第II-1章、合成綠色螢光蛋白環化產物CDHPMIO及反應機制探討 20 II-1-1 1-nitro-2-naphthaldehyde之合成 21 II-1-2 (Z)-5-((1-aminonaphthalen-2-yl)methylene)-3-(4-chlorophenyl)-2-methyl-3,5-dihydro-4H-imidazol-4-one (o-ANCMI) 之合成 23 II-1-3 (Z)-3-(4-chlorophenyl)-5-((1-((2,3-dihydroxypropyl)amino)naphthalen-2-yl)methylene)-2-methyl-3,5-dihydro-4H-imidazol-4-one (o-CDHPNMI) 之合成 26 II-1-4 8-(4-chlorophenyl)-11-(2,3-dihydroxypropyl)-9-methyl-8,11-dihydro-7H-benzo[g]pyrimido[4,5-b]indol-7-one (CDHPMIO) 之合成 27 第II-2章、綠色螢光蛋白發光團衍生物環化反應機制探討 30 第II-3章、綠色螢光蛋白衍生物o-CDHPNMI及各環化產物光譜性質 33 II-3-1 吸收光譜測定結果 33 II-3-2 螢光放射光譜測定結果 36 第II-4章、比較綠色螢光蛋白衍生物環化結構的光物理性質 40 第II-5章、結論 42 第III部分 實驗儀器與實驗方法 44 第III-1章、實驗儀器及測量方法 44 III-1-1 核磁共振光譜儀 (Nuclear Magnetic Resonance Spectrometer) 44 III-1-2 紫外-可見光光譜儀 (PerkinElmer, UV/Vis Spectrometry, Lambda 35) 44 III-1-3 螢光放射光譜 (PerkinElmer, Fluorescence Spectrometer, LS 45) 44 III-1-4 高解析質譜儀 (High Resolution Mass Spectrometry, ESI-MS) 44 III-1-5 單晶X-光繞射儀 (Single-Crystal X-Ray Diffractometer) 45 第III-2章、綠色螢光蛋白衍生物的合成 46 III-2-1 合成 1-nitro-2-naphthaldehyde 之三步驟 46 III-2-1-1 合成 2-methyl-1-nitronaphthalene 之步驟 46 III-2-1-2 合成 (E)-N,N-dimethyl-2-(1-nitronaphthalen-2-yl)ethen-1-amine 之步驟 47 III-2-1-3 合成 1-nitro-2-naphthaldehyde 之步驟 48 III-2-2 合成 (Z)-5-((1-aminonaphthalen-2-yl)methylene)-3-(4-chlorophenyl)-2-methyl-3,5-dihydro-4H-imidazol-4-one (o-ANCMI) 之四步驟 49 III-2-2-1 合成 (Z)-2-methyl-4-((1-nitronaphthalen-2-yl)methylene)oxazol-5(4H)-one 之步驟 49 III-2-2-2 合成 (Z)-2-acetamido-N-(4-chlorophenyl)-3-(1-nitronaphthalen-2-yl)acrylamide 之步驟 50 III-2-2-3 合成 (Z)-3-(4-chlorophenyl)-2-methyl-5-((1-nitronaphthalen-2-yl)methylene)-3,5-dihydro-4H-imidazol-4-one 之步驟 51 III-2-2-4 合成 (Z)-5-((1-aminonaphthalen-2-yl)methylene)-3-(4-chlorophenyl)-2-methyl-3,5-dihydro-4H-imidazol-4-one (o-ANCMI) 之步驟 52 III-2-3 合成 (Z)-3-(4-chlorophenyl)-5-((1-((2,3-dihydroxypropyl)amino)naphthalen-2-yl)methylene)-2-methyl-3,5-dihydro-4H-imidazol-4-one (o-CDHPNMI) 之步驟 53 III-2-4 合成 11-chloro-2-(4-chlorophenyl)-5-hydroxy-2a-(((2,2,6,6-tetramethylpiperidin-1-yl)oxy)methyl)-2,2a,4,5,5a,6-hexahydro-1H-3-oxa-2,2a1,6-triazabenzo[cd]naphtho[1,2-g]azulen-1-one (o-CDHPNMI-TEMPO) 之步驟 54 III-2-5 合成 8-(4-chlorophenyl)-11-(2,3-dihydroxypropyl)-9-methyl-8,11-dihydro-7H-benzo[g]pyrimido[4,5-b]indol-7-one (CDHPMIO) 之步驟 55 第III-3章、綠色螢光蛋白衍生物的基本物理性質測定 56 III-3-1 吸收光譜之測量及莫爾吸收係數之計算 56 III-3-2 螢光光譜之測量 56 III-3-3 螢光量子產率標準液校正之計算 56 III-3-3-1 Quinine sulfate (用於測定 CDHPNIO) 56 III-3-3-2 Rhodamine B (用於測定 o-CDHPNMI、o-CDHPNMI-TEMPO) 57 III-3-4 螢光量子產率之計算 57 第IV部分 參考文獻 59 第V部分 附錄 62 第V-1章、GFP 起始物及 GFP 衍生物 1H 及 13C NMR 光譜 62 V-1-1 化合物 2-methyl-1-nitronaphthalene 之 1H NMR (CDCl3, 400 MHz) 光譜 62 V-1-2 化合物 (E)-N,N-dimethyl-2-(1-nitronaphthalen-2-yl)ethen-1-amine 之 1H NMR (CDCl3, 400 MHz) 光譜 63 V-1-3 化合物 1-nitro-2-naphthaldehyde 之 1H NMR (CDCl3, 400 MHz) 光譜 64 V-1-4 化合物 (Z)-2-methyl-4-((1-nitronaphthalen-2-yl)methylene)oxazol-5(4H)-one之 1H NMR (CDCl3, 400 MHz) 光譜 65 V-1-5 化合物 (Z)-2-acetamido-N-(4-chlorophenyl)-3-(1-nitronaphthalen-2-yl)acrylamide 之 1H NMR (CDCl3, 400 MHz) 光譜 66 V-1-6 化合物 (Z)-3-(4-chlorophenyl)-2-methyl-5-((1-nitronaphthalen-2-yl)methylene)-3,5-dihydro-4H-imidazol-4-one 之 1H NMR (CDCl3, 400 MHz) 光譜 67 V-1-7 化合物 (Z)-5-((1-aminonaphthalen-2-yl)methylene)-3-(4-chlorophenyl)-2-methyl-3,5-dihydro-4H-imidazol-4-one (o-ANCMI) 之 1H NMR (CDCl3, 400 MHz) 光譜 68 V-1-8 化合物 (Z)-3-(4-chlorophenyl)-5-((1-((2,3-dihydroxypropyl)amino)naphthalen-2-yl)methylene)-2-methyl-3,5-dihydro-4H-imidazol-4-one (o-CDHPNMI) 之 1H NMR (CDCl3, 400 MHz) 光譜 69 V-1-9 化合物 (Z)-3-(4-chlorophenyl)-5-((1-((2,3-dihydroxypropyl)amino)naphthalen-2-yl)methylene)-2-methyl-3,5-dihydro-4H-imidazol-4-one (o-CDHPNMI) 之 13C NMR (CDCl3, 125 MHz) 光譜 70 V-1-10 化合物 11-chloro-2-(4-chlorophenyl)-5-hydroxy-2a-(((2,2,6,6-tetramethylpiperidin-1-yl)oxy)methyl)-2,2a,4,5,5a,6-hexahydro-1H-3-oxa-2,2a1,6-triazabenzo[cd]naphtho[1,2-g]azulen-1-one (o-CDHPNMI-TEMPO) 之 1H NMR (CDCl3, 400 MHz) 光譜 71 V-1-11 化合物 11-chloro-2-(4-chlorophenyl)-5-hydroxy-2a-(((2,2,6,6-tetramethylpiperidin-1-yl)oxy)methyl)-2,2a,4,5,5a,6-hexahydro-1H-3-oxa-2,2a1,6-triazabenzo[cd]naphtho[1,2-g]azulen-1-one (o-CDHPNMI-TEMPO) 之13C NMR (CDCl3, 125 MHz) 光譜 72 V-1-12 化合物 8-(4-chlorophenyl)-11-(2,3-dihydroxypropyl)-9-methyl-8,11-dihydro-7H-benzo[g]pyrimido[4,5-b]indol-7-one (CDHPMIO) 之 1H NMR (CDCl3, 700 MHz) 光譜 73 V-1-13 化合物 8-(4-chlorophenyl)-11-(2,3-dihydroxypropyl)-9-methyl-8,11-dihydro-7H-benzo[g]pyrimido[4,5-b]indol-7-one (CDHPMIO) 之 13C NMR (CDCl3, 125 MHz) 光譜 74 第V-2章、GFP衍生物質譜 75 V-2-1 化合物 (Z)-3-(4-chlorophenyl)-5-((1-((2,3-dihydroxypropyl)amino)naphthalen-2-yl)methylene)-2-methyl-3,5-dihydro-4H-imidazol-4-one (o-CDHPNMI) 之 ESI-Mass 資料 75 V-2-2 化合物 11-chloro-2-(4-chlorophenyl)-5-hydroxy-2a-(((2,2,6,6-tetramethylpiperidin-1-yl)oxy)methyl)-2,2a,4,5,5a,6-hexahydro-1H-3-oxa-2,2a1,6-triazabenzo[cd]naphtho[1,2-g]azulen-1-one (o-CDHPNMI-TEMPO) 之 ESI-Mass 資料 76 V-2-3 化合物 8-(4-chlorophenyl)-11-(2,3-dihydroxypropyl)-9-methyl-8,11-dihydro-7H-benzo[g]pyrimido[4,5-b]indol-7-one (CDHPMIO) 之 ESI-Mass 資料 77 第V-3章、GFP衍生物單晶繞射數據 78 V-3-1 化合物 11-chloro-2-(4-chlorophenyl)-5-hydroxy-2a-(((2,2,6,6-tetramethylpiperidin-1-yl)oxy)methyl)-2,2a,4,5,5a,6-hexahydro-1H-3-oxa-2,2a1,6-triazabenzo[cd]naphtho[1,2-g]azulen-1-one (o-CDHPNMI-TEMPO) 之單晶繞射資料 78

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