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研究生: 李宜臻
Li, Yi-Chen
論文名稱: 使用人工智慧技術應用在血管內超音波影像斑塊辨識
Coronary Plaque Characterization from IVUS Image by Using Artificial Intelligence Techniques
指導教授: 黃執中
Huang, Chih-Chung
學位類別: 碩士
Master
系所名稱: 工學院 - 生物醫學工程學系
Department of BioMedical Engineering
論文出版年: 2020
畢業學年度: 108
語文別: 英文
論文頁數: 53
中文關鍵詞: 動脈粥狀硬化血管內超音波深度學習卷積神經網路影像分割
外文關鍵詞: Atherosclerosis, Intravascular ultrasound imaging, Deep learning, Convolutional neural network, Image segmentation
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  • 隨著現代飲食文化的進步,愈來愈多的人口具有高血壓、肥胖等問題,間接造成心血管疾病的形成。心血管疾病的形成主要是來自於動脈粥狀硬化,動脈粥狀硬化是一個緩慢斑塊堆積的過程,一方面經由血液的流動而造成斑塊破裂,另一方面減少腦部血液供給而造成腦中風及心肌梗塞等疾病。血管內超音波目前為臨床上用來診斷動脈粥狀硬化的方式,因其具有即時成像與良好穿透性,在影像上提供較多血管壁的結構與組成資訊。現今商用影像系統提供一項藉由超音波回波訊號來提取訊號中的頻域資訊進行斑塊辨識的技術,一方面提供臨床上一個參考依據,但另一方面臨床醫師認為在斑塊辨識上仍有可以改善的空間。因此,此研究提出一個人工智慧技術應用在分割灰階血管內超音波影像的中膜-外膜邊界、管腔區域,並且定位鈣化斑塊堆積區域。
    模型的影像訓練資料是由彰化秀傳紀念醫院所提供,來自於18位受測者,總計為713張影像。其中每一張灰階血管內超音波影像資料由人工標記中膜-外膜所包圍面積、管腔區域及鈣化堆積的位置。在方法上,主要是利用深度學習中的卷積神經網路,並且配合疊加網路的概念,將三個神經網路互相連接,降低網路錯誤辨識非斑塊堆積區域的組織。此外,訓練過程中利用三種不同數學意義的損失函數修改模型內部的神經元之間的權重。在準確度的計算上使用Dice score、精確率(Precision)、召回率(Recall)及特異性(Specificity)來評估性能。
    在模型訓練過程中,由於斑塊堆積的面積及鈣化組織的位置與斑塊的穩定性有關,實驗主要是關注在斑塊區域與鈣化的辨識正確性。從實驗結果發現,此研究所提供的模型分割演算法在不同損失函數下,都能夠辨識斑塊區域達到高於90%的準確度,雖然鈣化的準確度落在67%,但相較於商用軟體與人工比較能夠提供高於兩倍的正確性。因此,此研究結果可以提供更加完善的辨識資訊,以利於後續的治療。

    With the advance of food culture in modern societies, there are more and more people suffer from hypertension and diabetes may result in cardiovascular diseases. The main factor for cardiovascular diseases is atherosclerosis which is a slow process and would finally lead to severe symptoms like myocardial infarction or brain stroke due plaque rupture or reduction of blood supply to the heart system or brain. Intravascular ultrasound (IVUS) imaging has been a common technique to diagnose atherosclerosis in clinical application. Owing to its characteristics of real-time and well penetration into vessel walls, IVUS imaging provides more geometrical information and composition of blood vessel walls. Inside recent commercial IVUS imaging system, the software named as Virtual Histology IVUS (VH-IVUS) imaging utilizes the backscattering radiofrequency ultrasound signals to attain its featured information from frequency domain. This technique on one hand is proved to correctly characterize plaque types into calcium, fibrous, fibro-fatty and necrotic cores and provides a referenced information in clinics. However, on the other hand, cardiologists consider that there is still improvement space on plaque characterization technique. Therefore, this study demonstrates a method based on artificial intelligence to segment borders of media-adventitia and luminal region as well as locations of calcified tissues.
    The in-vivo image dataset is provided from Show Chwan Memorial Hospital, Changhua, Taiwan and the number of images is 713 from 18 subjects with atherosclerosis. In the dataset, each grayscale IVUS image is labeled with classes of MA border, lumen and calcium. The proposed method utilized the method of convolutional neural network in deep learning technique incorporated with the concept of cascaded network to reduce the occurrence of incorrectly detection on the regions outside plaque burden by connecting triple neural networks. Besides, in the course of learning process, three loss functions with different mathematical properties are used to adapt the weighting parameters between neurons in convolutional networks. The evaluation measurement is implemented with Dice score, precision, recall and specificity to estimate the performance of the proposed method.
    In the duration of learning procedure, the region of interest is focused on accurate detection of the plaque regional size and calcified tissues since the stabilization or vulnerability of plaque burden is relevant to plaque region and location of calcium. From the experiments, the method proposed in this study could reach the high accuracy over 0.9 with the usage of various loss functions. Although the accuracy in detection of calcium is located at about 0.67, it could provide twice better accurate information in contrast to the results from VH-IVUS.
    These results could provide better characterized information for latter treatment strategies of atherosclerosis.

    摘要 II Abstract III 誌謝 V Contents VI List of Tables IX List of Figures X Chapter 1 Introduction 1 1.1 Background 1 1.1.1 Atherosclerosis 1 1.1.2 Diagnosing Instruments 1 1.1.3 IVUS-derived Virtual Histology (VH-IVUS) 2 1.2 Literature Reviews 3 1.2.1 Methods on Segmenting IVUS Images 3 1.2.2 Deep Learning on Image Segmentation 6 1.3 Motivations and Purpose 8 Chapter 2 Basic Theory 9 2.1 Ultrasound 9 2.1.1 Fundamental of Acoustic Propagation 9 2.1.2 Reflection and Refraction 10 2.1.3 Ultrasonic Imaging 11 2.2 IVUS Imaging 13 2.2.1 Specificities of IVUS 13 2.2.2 IVUS Transducer 13 2.2.3 IVUS Catheter 14 2.2.4 IVUS Imaging 15 2.2.5 IVUS Images Artifacts 15 2.2.6 IVUS-derived Virtual Histology (VH-IVUS) 15 2.3 Convolutional Neural Network 17 2.3.1 Development of Deep Learning 17 2.3.2 Convolution Operation 18 2.3.3 Pooling Operation 19 2.3.4 Backpropagation 20 2.3.5 Loss Functions and Optimizations 20 Chapter 3 Materials and Methods 21 3.1 Data Acquisition 21 3.2 Data Preprocessing 22 3.3 Semantic Convolutional Neural Network 23 3.3.1 Proposed Method 24 3.4 Evaluation Metric 26 3.4.1 Precision, Recall and Specificity 26 3.4.2 Dice Score (DSC) 27 3.5 Loss Functions 28 3.5.1 Dice Loss 28 3.5.2 Tversky Loss 28 3.5.3 Focal Loss 28 3.6 Leave-one-subject-out Cross Validation 30 3.7 Implementation Details 31 Chapter 4 Results 32 4.1 Various Loss Function Setting Experiments 32 4.2 Hyperparameter Experiments on Focal Loss Functions 38 4.3 Hyperparameter Experiments on Tversky Loss Function 40 4.4 Input Patch Size Setting Experiments 41 Chapter 5 Discussion 42 5.1 Loss Functions 42 5.2 CNN Models 44 5.3 Receptive Fields 46 5.4 Limitations 47 Chapter 6 Conclusion 48 Chapter 7 Future Work 49 References 50

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