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研究生: 陳俐伽
Chen, Li-jia
論文名稱: 神經壞死病毒非結構蛋白B1基因選殖及其功能之探討
Cloning and Characterization of RGNNV B1 Function
指導教授: 洪健睿
Hong, Jiann-Ruey
學位類別: 碩士
Master
系所名稱: 生物科學與科技學院 - 生物科技研究所
Institute of Biotechnology
論文出版年: 2007
畢業學年度: 95
語文別: 中文
論文頁數: 105
中文關鍵詞: 新生蛋白質抑制劑粒線體膜電位石斑魚背鰭細胞株B1基因細胞凋亡神經壞死病毒
外文關鍵詞: MMP loss, GF-1, cycloheximide, B1gene, Apoptosis, Nervous Necrosis Virus
相關次數: 點閱:105下載:4
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  • 神經壞死病毒 ( Nervous Necrosis Virus, NNV )會感染許多高經濟性魚種如石斑稚魚,造成高死亡率,而使得漁業經歷重大經濟損失衝擊。病毒本身之B1基因是否參與凋亡調控之機制尚不清楚,因此本論文著重於探討神經壞死病毒B1基因所扮演之角色。
    首先我們設計degenerate primer從病毒次基因體RNA3選殖非結構性蛋白基因B1,接著以B1基因做為探針進行北方墨漬法分析發現大小約0.38 kb RNA3在石斑魚背鰭細胞株(GF-1)中,經神經壞死病毒(RGNNV TN1)感染第12小時後開始表現。並利用自製抗B1蛋白之多株抗體偵測到在感染後第24小時B1蛋白質(11 kDa)開始持續表現,同時此新生之B1蛋白質也可被蛋白質合成抑制劑cycloheximide可有效抑制其生合成。另一方面,在功能性分析,首先產生大量表現B1蛋白之石斑魚細胞株,並利用NNV感染,以AnnexinⅤ及粒線體膜電位之消失測定中,表現蛋白質B1能降低細胞凋亡之數量與調節病毒蛋白之表現。反之,反義RNA可抑制病毒感染後之基因表現,並從結果得知細胞死亡時程提早約12小時及病毒蛋白表現量顯著增加。另外,將神經壞死病毒B1基因接合到黃色螢光基因(EYFP)後轉染細胞,可觀察到B1蛋白會累積在細胞核內。
    於本論文我們第一個針對B1蛋白基因的功能進行分析,希望藉此研究進一步明瞭神經壞死病毒誘發細胞凋亡之分子機制,能有助於對神經壞死病毒所造成之疾病的預防和治療。

    Some fish species are known to be infected by betanodaviruses. Betanodaviruses is belong to one of Nodaviridae member, causes an acute, contagious disease in a number of economically important fish species and resulted in severe mortality and significant economic losses to the aquaculture industry. Despite the severe economic impact on the aquaculture industry, betanodaviruses are not well studied, especially on their molecular pathogenesis.
    In the present time, we examine a non-structure protein B1 as a newly expression gene and its biological function in fish cells. We cloned that RGNNV B1 cDNA is a 330 nt in length, encoding for a 111 amino acids (11 kDa). Furthermore, by western blot analysis, B1 protein was expressed at 24 h post-infection (p.i.), and the protein expression of B1 could be blocked by protein synthesis inhibitor cycloheximide (CHX ; 0.33 μg/ml). In functional assay, the B1 protein were significantly blocked either PS exposure or mitochondrial membrane permeability (MMP) loss with RGNNV infection in B1 stabe expression of GF-1 cells. Then, knockdown of B1 expression by B1 antisense RNA promoted cell death. Finally, we found that the nuclear localization of B1 protein by fusing with EYFP reporter gene.
    Our results suggest that B1 as an early expression protein may play a crucial role on anti-apoptotic function and suppress the viral proteins expression with RGNNV infection.

    中文摘要 Ⅰ 英文摘要 Ⅲ 致謝 Ⅳ 目錄 Ⅴ 表圖目錄 Ⅶ 第一章、緒論 1 第一節、台灣石斑魚養殖概況 1 第二節、神經壞死病毒背景說明 1 第三節、細胞壞死與細胞凋亡 6 第四節、粒線體相關蛋白調控細胞凋亡之研究 10 第五節、研究目的 15 第二章、材料與方法 16 第一節、實驗材料 16 第二節、實驗儀器 22 第三節、研究方法及進行步驟 23 第三章、結果 43 第一節、 病毒B1基因選殖 43 第二節、 神經壞死病毒感染宿主細胞株後是否能表現B1基因 43 第三節、 重組蛋白B1之表現 44 1. 添加誘導劑IPTG誘導大腸桿菌大量表現重組蛋白B1 44 2. 重組蛋白B1之純化 44 3. 獲得重組蛋白B1之BSA定量 45 4. 抗B1蛋白之多株抗體的製備與純化 45 第四節、神經壞死病毒感染宿主細胞後B1蛋白表現情形 46 1. 神經壞死病毒感染不同魚類細胞株後B1蛋白表現情形 46 2. 神經壞死病毒感染宿主細胞株後各蛋白表現情形 46 3. 利用蛋白質新生成抑制劑CHX抑制細胞內蛋白質B1之合成 47 第五節、 B1基因功能之分析 48 1. 大量表現B1基因能延緩RGNNV TN1誘發GF-1細胞株之凋 亡 48 2. Knockdown B1基因能提早NNV誘發GF-1細胞株之死亡 51 第六節、非結構性蛋白B1於細胞內所在之位置分析 54 第四章、討論 55 第一節、 B1基因的存在及其可能扮演之角色 55 第二節、 神經壞死病毒B1蛋白之表現 56 第三節、 B1蛋白表現位置及功能之相關性 57 第五章、未來展望 60 參考文獻 61 表圖附錄 68 表一、病毒TCID50 之測定(Reed-Muench 公式) 68 表二、primer設計 69 表三、多株抗體抗蛋白B1之血清效價 70 圖一、細胞壞死與細胞凋亡特徵之比較 71 圖二、神經壞死病毒的基因組結構圖 72 圖三、細胞壞死與細胞凋亡途徑機制之說明 73 圖四、Bcl-2 家族成員圖 74 圖五、細胞凋亡經由動態利用Bcl-2 家族之互相作用來進行凋 亡與存活之調節 75 圖六、cytochrome c釋放引發細胞凋亡的途徑 76 圖七、RGNNV TN1 B1基因核酸及蛋白質序列 77 圖八、RGNNV TN1 B1蛋白序列同源性比對 78 圖九、pET29a-NNV-B1質體圖譜 79 圖十、pEYFP-C1-NNV-B1質體圖譜 80 圖十一、pcDNA3.1/V5-His TOPO-NNV-antisense B1質體圖譜 81 圖十二、以北方墨漬法偵測神經壞死病毒感染GF-1細胞株後 病毒RNA之表現情形 82 圖十三、(A) 重組蛋白B1在不同誘導時間下的表現量 (coomassie blue染色) 83 圖十三、(B) 重組蛋白B1在不同誘導時間下的表現量 (西方墨點法) 84 圖十四、利用不同濃度imidazole elution buffer將重組蛋白沖提 出來 85 圖十五、 純化之B1重組蛋白之蛋白質定量 86 圖十六、抗B1多株抗體純化後之蛋白質定量 87 圖十七、神經壞死病毒感染不同魚類細胞株後B1蛋白表現情形 88 圖十八、神經壞死病毒感染宿主細胞株後各蛋白表現情形 89 圖十九、CHX能抑制病毒蛋白質B1的合成 90 圖二十、EYFP-3及EYFP-B1-5穩定表現細胞株 91 圖二十一、(A) Annexin-V染色偵測B1基因穩定表現細胞株可延 遲神經壞死病毒所誘發GF-1細胞株PS外翻現象 92 圖二十一、(B)(C) B1基因在細胞中大量表現可延遲神經壞死病 毒誘發PS外翻之量化圖 93 圖二十二、神經壞死病毒感染會造成GF-1粒腺體膜電位改變 94 圖二十三、B1基因在細胞中大量表現可延遲神經壞死病毒誘 發之粒腺體膜電位改變 95 圖二十四、B1基因在細胞中大量表現可延遲神經壞死病毒個別 基因之蛋白表現 96 圖二十五、antisense RNA可抑制B1基因之表現 97 圖二十六、(A) Knckdown B1基因會促進神經壞死病毒誘發PS 外翻 98 圖二十六、(B) (C) Knockdown B1基因造成神經壞死病毒誘發 大量細胞PS外翻之量化圖 99 圖二十七、Knockdown B1基因造成神經壞死病毒誘發大量細 胞之粒腺體膜電位改變 100 圖二十八、在細胞中表現B1基因之antisense RNA會促進神 經壞死病毒個別基因之蛋白表現 101 圖二十九、pEYFP-C1及pEYFP-B1轉染至GF-1細胞後,第 48小時黃色螢光蛋白表現情形 102 圖三十、pEYFP-C1及pEYFP-C1-NNV-B1轉染至GL-av細 胞後,第24、48小時黃色螢光蛋白表現情形 103 圖三十一、結論 104 自述 105

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