| 研究生: |
洪承榆 Hong, Cheng-Yu |
|---|---|
| 論文名稱: |
琥珀醯輔酶A連接酶 (ADP形成)β亞基在乳癌的影響 The effect of succinate-CoA ligase ADP-forming subunit beta (SUCLA2) on breast cancer |
| 指導教授: |
張文粲
Chang, Wen-Tsan |
| 學位類別: |
碩士 Master |
| 系所名稱: |
醫學院 - 生物化學暨分子生物學研究所 Department of Biochemistry and Molecular Biology |
| 論文出版年: | 2021 |
| 畢業學年度: | 109 |
| 語文別: | 中文 |
| 論文頁數: | 68 |
| 中文關鍵詞: | 乳癌 、琥珀醯輔酶 A 連接酶 (SUCL) 、琥珀醯輔酶A連接酶 (ADP形成) β亞基(SUCLA2) 、生物資訊資料庫 、SUCLA2 抑制細胞株 |
| 外文關鍵詞: | bioinformatics database, breast cancer, Succinyl-CoA ligase (SUCL), Succinate-CoA Ligase ADP-Forming Subunit Beta (SUCLA2), SUCLA2 knockdown |
| 相關次數: | 點閱:127 下載:0 |
| 分享至: |
| 查詢本校圖書館目錄 查詢臺灣博碩士論文知識加值系統 勘誤回報 |
琥珀醯輔酶A合成酶 (Succinyl-coenzyme A synthetase,又稱Succinate-CoA Ligase)是三羧酸循環 (tricarboxylic acid cycle)中的關鍵酵素,其代謝途徑參與著電子傳遞鏈(electron transport chain)及丙酸代謝路徑 (propanoate metabolism)。琥珀醯輔酶A連接酶是一種異二聚體,由α亞基及β亞基所構成。α亞基編碼的基因為SUCLG1,功能是將琥珀醯輔酶A轉化為琥珀酸。β亞基由SUCLA2及SUCLG2所編碼,不同的β亞基可以决定酶對ADP或GDP的特異性。為了研究SUCLA2在不同癌症中的表達程度,利用大型資料庫分析SUCLA2與癌症的關聯性。在cBioPortal資料庫分析結果表明,基因sucla2在大多數癌症中呈現缺失。同時,SUCLA2之mRNA表現程度在乳癌中相較於正常乳腺組織呈現下調趨勢。此外,Prognoscan資料庫顯示在癌症中SUCLA2的低表達對病人有較差的預後。以上資訊表明了SUCLA2在癌症中扮演著抑癌基因的角色。然而,目前研究對於SUCLA2在乳癌發展的相關作用機制尚未明瞭。在本篇研究中,使用RNAi技術構建了一個穩定抑制SUCLA2的乳癌細胞株 (BT474及MDA-MB-231)。並透過實驗分析其細胞型態,生長,爬行等相關機能性測試。與對照細胞相比,SUCLA2基因靜默之細胞株在細胞生長、群落形成及細胞攤開能力有顯著的提升,這表明SUCLA2基因靜默促進了乳癌細胞的侵襲和擴散。透過MTT測定細胞內粒線體的琥珀酸脫氫酶 (Succinate dehydrogenase, SDH)活性,結果呈現其活性下降,並發現在纖連蛋白下細胞貼附能力之改變。在西方墨點法分析結果呈現抑制SUCLA2表達之細胞株上調了細胞內糖解蛋白GLUT3、HK1和HK2的表達,且改變了EMT蛋白表現程度。總而言之,以上實驗結果證實了SUCLA2對於乳癌之惡性程度扮演重要角色。此研究連結了乳癌與抑制內源性SUCLA2表達對於癌症惡性程度之分析。
Succinyl coenzyme A synthetase (SCS, also called succinate-CoA ligase) is a critical enzyme in TCA cycle and participates in propanoate metabolism and metabolic pathways. The enzyme reversibly converts succinyl-CoA into succinate. Succinate-CoA ligase is a heterodimer that consists of α and β subunits. The β subunit is encoded by either SUCLG2 or SUCLA2, which determines the enzyme specificity for either GDP or ADP. SUCLA2 accompanied with the substrate-level phosphorylation of ADP to ATP is highly expressed in brain, muscle and heart. In order to study the expression of SUCLA2 in a variety of cancers, we used mega database to analyze the relationship between SUCLA2 and cancer. Analysis of the cBioPortal database showed that sucla2 gene was deleted in most of cancers. Also, SUCLA2 level was down-regulated in breast cancer. In addition, the Prognoscan database revealed that low SUCLA2 expression level in breast cancer had a poor prognosis. However, the function of SUCLA2 in breast cancer development is still unknown. In this study, we used the RNAi technique to construct a stable cell line of the SUCLA2 knockdown in breast cancer cells (BT474 and MDA-MB-231). Compared to the control cells, SUCLA2 knockdown cells had a significant effect on cell growth, colony formation, cell-spreading and cell adhesion ability, which means knockdown SUCLA2 promoted the cell invasion and migration. MTT assay showed knockdown SUCLA2 decreased the succinate dehydrogenase activity in breast cancer cells. In western blot, knockdown SUCLA2 cells up-regulated GLUT3, HK1 and HK2 expression, indicating the glycolysis function was increased. Knockdown SUCLA2 cells also changed the protein expression level of EMT marker. In conclusion, knockdown of SUCLA2 expression increased the tumor progression in breast cancer. This study contributes new insight into the role of SUCLA2 in breast cancer development.
1. Brian, et al., Lysine Succinylation Is a Frequently Occurring Modification in Prokaryotes and Eukaryotes and Extensively Overlaps with Acetylation. Cell Reports, 2013. 4(4): p. 842-851.
2. Liberti, M.V. and J.W. Locasale, The Warburg Effect: How Does it Benefit Cancer Cells? Trends in Biochemical Sciences, 2016. 41(3): p. 211-218.
3. Patra, K.C. and N. Hay, The pentose phosphate pathway and cancer. Trends in Biochemical Sciences, 2014. 39(8): p. 347-354.
4. Akins, N.S., T.C. Nielson, and H.V. Le, Inhibition of Glycolysis and Glutaminolysis: An Emerging Drug Discovery Approach to Combat Cancer. Current Topics in Medicinal Chemistry, 2018. 18(6): p. 494-504.
5. Pacella, I., et al., Fatty acid metabolism complements glycolysis in the selective regulatory T cell expansion during tumor growth. Proceedings of the National Academy of Sciences, 2018. 115(28): p. E6546-E6555.
6. Yu, L., et al., The Glycolytic Switch in Tumors: How Many Players Are Involved? Journal of Cancer, 2017. 8(17): p. 3430-3440.
7. Yang, L., S. Venneti, and D. Nagrath, Glutaminolysis: A Hallmark of Cancer Metabolism. Annual Review of Biomedical Engineering, 2017. 19(1): p. 163-194.
8. Chen, X.J. and R.A. Butow, The organization and inheritance of the mitochondrial genome. Nature Reviews Genetics, 2005. 6(11): p. 815-825.
9. Porporato, P.E., et al., Mitochondrial metabolism and cancer. Cell Research, 2018. 28(3): p. 265-280.
10. Penta, J.S., et al., Mitochondrial DNA in human malignancy. Mutation Research/Reviews in Mutation Research, 2001. 488(2): p. 119-133.
11. Pollard, P.J., et al., Accumulation of Krebs cycle intermediates and over-expression of HIF1α in tumours which result from germline FH and SDH mutations. Human Molecular Genetics, 2005. 14(15): p. 2231-2239.
12. Dang, L., et al., Cancer-associated IDH1 mutations produce 2-hydroxyglutarate. Nature, 2009. 462(7274): p. 739-744.
13. Toro, J.R., et al., Mutations in the Fumarate Hydratase Gene Cause Hereditary Leiomyomatosis and Renal Cell Cancer in Families in North America. The American Journal of Human Genetics, 2003. 73(1): p. 95-106.
14. Ostergaard, E., et al., Mitochondrial encephalomyopathy with elevated methylmalonic acid is caused by SUCLA2 mutations. Brain, 2007. 130(3): p. 853-861.
15. Carrozzo, R., et al., SUCLA2 mutations are associated with mild methylmalonic aciduria, Leigh-like encephalomyopathy, dystonia and deafness. Brain, 2007. 130(3): p. 862-874.
16. Burch, J.S., et al., Glutamine via α-ketoglutarate dehydrogenase provides succinyl-CoA for heme synthesis during erythropoiesis. Blood, 2018. 132(10): p. 987-998.
17. Laffel, L., Ketone bodies: a review of physiology, pathophysiology and application of monitoring to diabetes. DIABETES/METABOLISM RESEARCH AND REVIEWS, 1999. 15(6): p. 412-426.
18. Hertz, L. and D.L. Rothman, Glucose, Lactate, β-Hydroxybutyrate, Acetate, GABA, and Succinate as Substrates for Synthesis of Glutamate and GABA in the Glutamine–Glutamate/GABA Cycle. 2016, Springer International Publishing. p. 9-42.
19. Johnson, J.D., W.W. Muhonen, and D.O. Lambeth, Characterization of the ATP- and GTP-specific Succinyl-CoA Synthetases in Pigeon. Journal of Biological Chemistry, 1998. 273(42): p. 27573-27579.
20. El-Hattab, A.W. and F. Scaglia, Mitochondrial DNA Depletion Syndromes: Review and Updates of Genetic Basis, Manifestations, and Therapeutic Options. Neurotherapeutics, 2013. 10(2): p. 186-198.
21. Besse, A., et al., The GABA Transaminase, ABAT, Is Essential for Mitochondrial Nucleoside Metabolism. Cell Metabolism, 2015. 21(3): p. 417-427.
22. McCormack, S.E., et al., Mitochondrial DNA Depletion Syndromes Presenting in Childhood. 2016, Elsevier. p. 187-198.
23. Maas, R.R., et al., SUCLA2 Deficiency: A Deafness-Dystonia Syndrome with Distinctive Metabolic Findings (Report of a New Patient and Review of the Literature). 2015, Springer Berlin Heidelberg. p. 27-32.
24. Carrozzo, R., et al., Succinate-CoA ligase deficiency due to mutations in SUCLA2 and SUCLG1: phenotype and genotype correlations in 71 patients. Journal of Inherited Metabolic Disease, 2016. 39(2): p. 243-252.
25. Kohno, S., et al., Pharmacologically targetable vulnerability in prostate cancer carrying RB1-SUCLA2 deletion. Oncogene, 2020. 39(34): p. 5690-5707.
26. Onitilo, A.A., et al., Breast Cancer Subtypes Based on ER/PR and Her2 Expression: Comparison of Clinicopathologic Features and Survival. Clinical Medicine & Research, 2009. 7(1-2): p. 4-13.
27. Montemurro, F., et al., Clinical utility of exemestane in the treatment of breast cancer . International Journal of Women's Health, 2015: p. 551.
28. Yao, Y., et al., Risk factors for distant metastasis of patients with primary triple-negative breast cancer. Bioscience Reports, 2019. 39(6).
29. Engel, C., et al., Prevalence of pathogenic BRCA1/2 germline mutations among 802 women with unilateral triple-negative breast cancer without family cancer history. BMC Cancer, 2018. 18(1).
30. Kuchenbaecker, K.B., et al., Risks of Breast, Ovarian, and Contralateral Breast Cancer for BRCA1 and BRCA2 Mutation Carriers. JAMA, 2017. 317(23): p. 2402.
31. Hu, L., X. Yao, and Y. Shen, Altered mitochondrial DNA copy number contributes to human cancer risk: evidence from an updated meta-analysis. Scientific Reports, 2016. 6(1): p. 35859.
32. Potter, M., E. Newport, and K.J. Morten, The Warburg effect: 80 years on. Biochemical Society Transactions, 2016. 44(5): p. 1499-1505.
33. Hsu, C.-C., L.-M. Tseng, and H.-C. Lee, Role of mitochondrial dysfunction in cancer progression. Experimental Biology and Medicine, 2016. 241(12): p. 1281-1295.
34. Hayashi, Y., et al., Hypoxia/pseudohypoxia‐mediated activation of hypoxia‐inducible factor‐1α in cancer. Cancer Science, 2019. 110(5): p. 1510-1517.
35. Kim, J.-W. and C.V. Dang, Cancer's Molecular Sweet Tooth and the Warburg Effect. Cancer Research, 2006. 66(18): p. 8927-8930.
36. Ciavardelli, D., et al., Breast cancer stem cells rely on fermentative glycolysis and are sensitive to 2-deoxyglucose treatment. Cell Death & Disease, 2014. 5(7): p. e1336-e1336.
37. Ma, Y., et al., Mitochondrial dysfunction in human breast cancer cells and their transmitochondrial cybrids. Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2010. 1797(1): p. 29-37.
38. Vander Heiden, M.G., L.C. Cantley, and C.B. Thompson, Understanding the Warburg Effect: The Metabolic Requirements of Cell Proliferation. Science, 2009. 324(5930): p. 1029-1033.
39. Lin, C.-C., et al., Loss of the respiratory enzyme citrate synthase directly links the Warburg effect to tumor malignancy. Scientific Reports, 2012. 2(1).
40. Ribatti, D., R. Tamma, and T. Annese, Epithelial-Mesenchymal Transition in Cancer: A Historical Overview. Translational Oncology, 2020. 13(6): p. 100773.
41. Gut, P., et al., SUCLA2 mutations cause global protein succinylation contributing to the pathomechanism of a hereditary mitochondrial disease. Nature Communications, 2020. 11(1).
42. Helleman, J., et al., Association of an Extracellular Matrix Gene Cluster with Breast Cancer Prognosis and Endocrine Therapy Response. Clinical Cancer Research, 2008. 14(17): p. 5555-5564.
43. Yao, E.S., et al., Increased β1 Integrin Is Associated with Decreased Survival in Invasive Breast Cancer. Cancer Research, 2007. 67(2): p. 659-664.
44. Li, C.-L., et al., Fibronectin induces epithelial-mesenchymal transition in human breast cancer MCF-7 cells via activation of calpain. Oncology Letters, 2017. 13(5): p. 3889-3895.
45. Brasil, S., et al., Improving the diagnosis of cobalamin and related defects by genomic analysis, plus functional and structural assessment of novel variants. Orphanet Journal of Rare Diseases, 2018. 13(1).
46. Rutter, J., D.R. Winge, and J.D. Schiffman, Succinate dehydrogenase – Assembly, regulation and role in human disease. Mitochondrion, 2010. 10(4): p. 393-401.
47. Huang, X., et al., Succinyl-CoA synthetase ( SUCLA2 ) deficiency in two siblings with impaired activity of other mitochondrial oxidative enzymes in skeletal muscle without mitochondrial DNA depletion. Molecular Genetics and Metabolism, 2017. 120(3): p. 213-222.
48. Elpeleg, O., et al., Deficiency of the ADP-Forming Succinyl-CoA Synthase Activity Is Associated with Encephalomyopathy and Mitochondrial DNA Depletion. The American Journal of Human Genetics, 2005. 76(6): p. 1081-1086.
49. Lacombe, M.-L., et al., The Human Nm23/Nucleoside Diphosphate Kinases. Journal of Bioenergetics and Biomembranes, 2000. 32(3): p. 247-258.
50. Chinopoulos, C., et al., Mutated SUCLG1 causes mislocalization of SUCLG2 protein, morphological alterations of mitochondria and an early-onset severe neurometabolic disorder. Molecular Genetics and Metabolism, 2019. 126(1): p. 43-52.
51. Kacso, G., et al., Two transgenic mouse models for β-subunit components of succinate-CoA ligase yielding pleiotropic metabolic alterations. Biochemical Journal, 2016. 473(20): p. 3463-3485.
52. Hirschey, M.D. and Y. Zhao, Metabolic Regulation by Lysine Malonylation, Succinylation, and Glutarylation. Molecular & Cellular Proteomics, 2015. 14(9): p. 2308-2315.
53. Smestad, J., et al., Chromatin Succinylation Correlates with Active Gene Expression and Is Perturbed by Defective TCA Cycle Metabolism. iScience, 2018. 2: p. 63-75.
54. Kurmi, K., et al., Carnitine Palmitoyltransferase 1A Has a Lysine Succinyltransferase Activity. Cell Reports, 2018. 22(6): p. 1365-1373.
55. Wang, Y., et al., KAT2A coupled with the α-KGDH complex acts as a histone H3 succinyltransferase. Nature, 2017. 552(7684): p. 273-277.
56. Tong, Y., et al., SUCLA2-coupled regulation of GLS succinylation and activity counteracts oxidative stress in tumor cells. Molecular Cell, 2021. 81(11): p. 2303-2316.e8.
57. Xu, H., et al., Lysine Acetylation and Succinylation in HeLa Cells and their Essential Roles in Response to UV-induced Stress. Scientific Reports, 2016. 6(1): p. 30212.
58. Li, F., et al., NADP+-IDH Mutations Promote Hypersuccinylation that Impairs Mitochondria Respiration and Induces Apoptosis Resistance. Molecular Cell, 2015. 60(4): p. 661-675.
59. Boylston, J.A., et al., Characterization of the cardiac succinylome and its role in ischemia–reperfusion injury. Journal of Molecular and Cellular Cardiology, 2015. 88: p. 73-81.
60. Du, J., et al., Sirt5 Is a NAD-Dependent Protein Lysine Demalonylase and Desuccinylase. Science, 2011. 334(6057): p. 806-809.
61. Bringman-Rodenbarger, L.R., et al., Emerging Roles for SIRT5 in Metabolism and Cancer. Antioxidants & Redox Signaling, 2018. 28(8): p. 677-690.
62. Liu, J., et al., Histone succinylation and its function on the nucleosome. Journal of Cellular and Molecular Medicine, 2021.
63. Zorro Shahidian, L., et al., Succinylation of H3K122 destabilizes nucleosomes and enhances transcription. EMBO reports, 2021. 22(3).