簡易檢索 / 詳目顯示

研究生: 丁乃筑
Ding, Nai-Jhu
論文名稱: 探討hnRNP Q1及hnRNP A2/B1對於Aurora-A 轉譯調控之機制
Studying the role of hnRNP Q1 and hnRNP A2/B1 in Aurora-A translation
指導教授: 洪良宜
Hung, Liang-Yi
學位類別: 碩士
Master
系所名稱: 生物科學與科技學院 - 生物資訊與訊息傳遞研究所
Insitute of Bioinformatics and Biosignal Transduction
論文出版年: 2012
畢業學年度: 100
語文別: 中文
論文頁數: 82
中文關鍵詞: Aurora-AhnRNP Q1hnRNP A2/B1轉譯調控
外文關鍵詞: Aurora-A, hnRNP Q1, hnRNP A2/B1, translational regulation
相關次數: 點閱:124下載:2
分享至:
查詢本校圖書館目錄 查詢臺灣博碩士論文知識加值系統 勘誤回報
  • Aurora-A 是一個serine/threonine蛋白激酶,參與在中心體成熟、有絲分裂期的進入、紡錘體組成和染色體分離。Aurora-A功能異常會造成中心體增殖,染色體無法正確分離到子細胞中,以致細胞染色體數目不正常,最後導致腫瘤形成。在許多的癌細胞中,Aurora-A 皆有過量表現的情形。我們過去的研究顯示,在EGF 的刺激之下,會透過Aurora-A mRNA特定的五端不轉譯區(5’UTR)來增加Aurora-A mRNA 轉譯的效率。同時,hnRNP Q1及hnRNP A2/B1這兩個RNA結合蛋白,則可能參與此Aurora-A mRNA轉譯的過程。在本研究中,我們先確認在人類臨床大腸直腸癌組織中,Aurora-A mRNA大多是具有此特定的五端不轉譯區的同源異構物。In vivo translation assay以及ribosomal protein S6 免疫沈澱實驗顯示,過量表現hnRNP Q1會增加Aurora-A mRNA轉譯的效率,而過量表現hnRNP A2/B1則會減少Aurora-A mRNA的轉譯效率。Biotin pull-down assay以及RNA 免疫沈澱的結果顯示,hnRNP Q1及hnRNP A2/B1分別會結合上Aurora-A mRNA五端不轉譯區不同的區域。利用BIAcore assay,我們亦確定了hnRNP Q1與Aurora-A五端不轉譯區結合的位置。以PCR分析臨床大腸直腸癌組織中Aurora-A及hnRNP Q1的表現,發現這兩者具有正相關。根據以上結果,我們認為hnRNP Q1及hnRNP A2/B1會透過與Aurora-A五端不轉譯區的結合,進而調控Aurora-A mRNA的轉譯。

    Aurora-A is a serine/threonine kinase that involved in centrosome maturation, mitotic entry, spindle assembly and chromosome segregation. Dysregulation of Aurora-A results in centrosome amplification, cytokinesis failure, aneuploidy, and finally leads to tumor formation. It was reported that Aurora-A is overexpressed in a lot of cancers. Our previously studies indicated that EGF can translational up-regulate the expression of Aurora-A through a specific 5’-untranslated region (5’UTR). In addition, hnRNP Q1 and hnRNP A2/B1 may participate the translational regulation of Aurora-A mRNA. In this study, we investigate the role of hnRNP Q1 and hnRNP A2/B1 in translational regulating Aurora-A. The expression pattern of Aurora-A mRNA isoforms in human colorectal cancer was firstly confirmed by real-time PCR. In vivo translation assay and ribosomal protein S6-immunoprecipitation assay showed that hnRNP Q1 can increase the translation efficiency of Aurora-A, however hnRNP A2/B1 plays an opposite role. The biotin pull-down assay indicates hnRNP Q1 and hnRNP A2/B1 prefers to interact with different region of Aurora-A 5’UTR. BIAcore assay confirmed the Aurora-A 5’UTR-binding domain of hnRNP Q1. The expression of Aurora-A and hnRNP Q presents a positive correlation in clinical human colorectal cancer specimens by RT-PCR analysis. Taken together, our results suggest that hnNRP Q1 and hnRNP A2/B1 may translationally regulate Aurora-A mRNA through its 5’UTR.

    中文摘要 I Abstract II 致 謝 III 目錄 V 圖目錄 IX 附錄目錄 X 縮寫檢索表 XI 第一章 緒論 1 1-1. Aurora-A kinase 2 1-1.1 Aurora激酶家族 2 1-1.2 Aurora-A的功能及活性 2 1-1.3 Aurora-A 與腫瘤生成 (tumorigenesis) 之關係 4 1-2. mRNA 5’UTR對轉譯調控的重要性 5 1-3. Aurora-A 5’UTR的同源異構物( isoforms) 6 1-4. mRNA-binding proteins (mRNA結合蛋白質) 對轉譯調控的影響 6 1-4.1 Heterogeneous ribonucleoproteins Q (HnRNP Q) 8 1-4.2 Heterogeneous ribonucleoproteins A2/B1 (HnRNP A2/B1) 9 1-5. 研究動機 10 1-6. 研究目的 10 第二章 實驗材料與方法 12 2-1細胞株培養 12 2-2短暫性轉殖感染( Transient transfection) 12 2-3質體轉殖(Transformation) 13 2-4抽取小量質體DNA (Mini prep) 14 2-5抽取大量質體DNA (Midi prep) 15 2-6萃取DNA(DNA extraction) 16 2-7 全量RNA抽取 17 2-8反轉錄-聚合酶連鎖反應(Reverse-transcription Polymerase Chain Reaction, RT-PCR) 17 2-9即時定量聚合酶連鎖反應(Real-time Polymerase Chain Reaction, Real-time PCR) 20 2-10全細胞液抽取(Total cell lysate) 21 2-11分離萃取細胞質細胞液 22 2-12蛋白質濃度測定 22 2-13西方墨點法(Western blotting) 23 2-14 生物素 pull-down測定(Biotin pull-down assay) 27 2-15 全自動生物感測儀(BIAcore 3000) 28 2-16細胞內轉譯活性測定(In vivo translation assay) 31 2-17 報導基因分析 (Reporter luciferase assay) 31 2-18 免疫組織化學染色 (Immunohistochemical staining) 31 第三章 實驗結果 34 3-1 在大腸直腸癌細胞及臨床檢體中Aurora-A 5’UTR的表現模式是一致的 34 3-2 大腸瘜肉(colon polyp)會表現Aurora-A 35 3-3 觀察hnRNP Q1及hnRNP A2/B1在細胞內分布的位置及其與Aurora-A 5’UTR的結合關係 36 3-4 建立各種GST-hnRNP Q1缺失片段(GST-hnRNP Q1 truncate fragments)以尋找hnRNP Q1與Aurora-A 5’UTR結合的區域 36 3-5 以siRNA 抑制hnRNP Q會影響Aurora-A 蛋白的表現 38 3-6 過量表現GFP-hnRNP Q1會增加Aurora-A 轉譯效率 38 3-7 過量表現及抑制hnRNP A2/B1會影響Aurora-A 蛋白的表現 39 3-8 過量表現Myc-hnRNP A2/B1 會抑制Aurora-A 轉譯效率 40 3-9在人類臨床大腸直腸癌檢體中Aurora-A 及hnRNP Q的表現有正相關性 40 3-10 總結 41 第四章 討論 43 4-1 Aurora-A exon2對於Aurora-A過量表現的意義 43 4-2 HnRNP Q1、hnRNP A2/B1與Aurora-A 5’UTR 三者的關係 44 第五章 參考文獻 48 附圖 55 附錄 73

    1. Graziano Pesole, Flavio Mignone, Carmela Gissi, Grillo G, Flavio Licciulli, Liuni S: Structural and functional features of eukaryotic mRNA untranslated regions. Gene2001, 276:73-81.
    2. Van der Velden AW, Thomas, A.A.: The role of the 5' untranslated region of an mRNA in translation regulation during development. Int JBiochem Cell Biol 1999, 31:87–106.
    3. Pesole G, Grillo, G., Larizza, A., Liuni, S.: The untranslated regions of eukaryotic mRNAs structure, function, evolution and bioinformatic tools for their analysis. Brief Bioinform 2000, 1: 236–249.
    4. Bashirullah A, Cooperstock, R.L., Lipshitz, H.D.: RNA localization in development. Annu Rev Biochem 1998, 67:335-394.
    5. Wilkie GS, Dickson KS, Gray NK: Regulation of mRNA translation by 5′- and 3′-UTR-binding factors. Trends in Biochemical Sciences 2003, 28(4):182-188.
    6. Pesole G, Mignone F, Gissi C, Grillo G, Licciulli F, Liuni S: Structural and functional features of eukaryotic mRNA untranslated regions. Gene 2001, 276(1-2):73-81.
    7. Marumoto T, Zhang D, Saya H: Aurora-A - a guardian of poles. Nature reviews Cancer 2005, 5(1):42-50.
    8. Carmena M, Earnshaw WC: The cellular geography of aurora kinases. Nature reviews Molecular cell biology 2003, 4(11):842-854.
    9. SAEKI T, OUCHI M, OUCHI T: Physiological and Oncogenic Aurora-A Pathway. Int J Biol Sci 2009, 5:758-762.
    10. Hirota T, Kunitoku N, Sasayama T, Marumoto T, Zhang D, Nitta M, Hatakeyama K, Saya H: Aurora-A and an interacting activator, the LIM protein Ajuba, are required for mitotic commitment in human cells. Cell 2003, 114:585-598.
    11. Fu J, Bian M, Jiang Q, Zhang C: Roles of Aurora kinases in mitosis and tumorigenesis. Molecular cancer research : MCR 2007, 5(1):1-10.
    12. Giet R, McLean D, Descamps S, Lee MJ, Raff JW, Prigent C, Glover DM: Drosophila Aurora A kinase is required to localize D-TACC to centrosomes and to regulate astral microtubules. The Journal of cell biology 2002, 156(3):437-451.
    13. Conte N, Delaval B, Ginestier C, Ferrand A, Isnardon D, Larroque C, Prigent C, Seraphin B, Jacquemier J, Birnbaum D: TACC1-chTOG-Aurora A protein complex in breast cancer. Oncogene 2003, 22(50):8102-8116.
    14. Bellanger J-M, nczy PG: TAC-1 and ZYG-9 form a complex that promotes microtubule assembly in C. elegans embryos. Current Biology 2003, 13:1488–1498.
    15. Hirota T, Naoko Kunitoku, Sasayama T, Marumoto T, Zhang D, Nitta M, Hatakeyama K, Saya H: Aurora-A and an interacting activator, the LIM protein Ajuba, are required for mitotic commitment in human cells. Cell 2003, 114:585–598.
    16. Kunitoku N, Sasayama T, Marumoto T, Zhang D, Honda S, Kobayashi O, Hatakeyama K, Ushio Y, Saya H, Hirota T: CENP-A phosphorylation by Aurora-A in prophase is required for enrichment of Aurora-B at inner centromeres and for kinetochore function. 2003, 5: 853–864.
    17. Marumoto T, Honda S, Hara T, Nitta M, Hirota T, Kohmura E, Saya H: Aurora-A kinase maintains the fidelity of early and late mitotic events in HeLa cells. The Journal of biological chemistry 2003, 278(51):51786-51795.
    18. Honda K, Mihara H, Kato Y, Yamaguchi A, Tanaka H, Yasuda H, Furukawa K, Urano T: Degradation of human Aurora2 protein kinase by the anaphase-promoting complex-ubiquitin-proteasome pathway. Oncogene 2000, 19: 2812 ± 2819.
    19. Anna Castro, Suzanne Vigneron, Cyril Bernis, Jean-Claude Labbé, Prigent C, Lorca T: The D-Box-activating domain (DAD) is a new proteolysis signal that stimulates the silent D-Box sequence of Aurora-A. EMBO reports 2002] 3:1209–1214.
    20. Tatiana M. Gritsko, Domenico Coppola, June E. Paciga, : Activation and overexpression of centrosome kinase BTAKAurora-A in human ovarian cancer. Clin Cancer Res2003, 9:1420-1426.
    21. Takuji Tanaka, Masashi Kimura, Kengo Matsunaga ea: Centrosomal kinase AIK1 is overexpressed in invasive ductal carcinoma of the breast. Cancer research 1999, 59:2041-2044.
    22. Meraldi P, Honda R, Nigg EA: Aurora kinases link chromosome segregation and cell division to cancer susceptibility. Current opinion in genetics & development 2004, 14(1):29-36.
    23. Giet R, Petretti C, Prigent C: Aurora kinases, aneuploidy and cancer, a coincidence or a real link? Trends in cell biology 2005, 15(5):241-250.
    24. Hongyi Zhou, Jian Kuang, Ling Zhong, Wen-lin Kuo, Joe W. Gray, Aysegul Sahin, Brinkley BR, Sen S: Tumour amplified kinase STK15BTAK induces centrosome amplification, aneuploidy and transformation. Nature America Inc 1998 20:189-193.
    25. C Sakakura, A Hagiwara, R Yasuoka, Y Fujita, M Nakanishi, K Masuda, K Shimomura , Y Nakamura, J Inazawa TA, Yamagishi H: Tumour-amplified kinase BTAK is amplified and overexpressed in gastric cancers with possible involvement in aneuploid formation. British Journal of Cancer 2001, 84: 824–831.
    26. Gray NK, Wickens M: Control of translation initiation in animals. Annu Rev Cell Dev Biol 1998, 14:399–458.
    27. Flavio Mignone, Carmela Gissi, Liuni S, Pesole G: Untranslated regions of mRNAs. Genome Biology 2002, 3:1-10.
    28. Lai CH, Tseng JT, Lee YC, Chen YJ, Lee JC, Lin BW, Huang TC, Liu YW, Leu TH, Chen YP et al: Translational up-regulation of Aurora-A in EGFR-overexpressed cancer. Journal of cellular and molecular medicine 2010, 14(6B):1520-1531.
    29. Dreyfuss G, Kim VN, Kataoka N: Messenger-RNA-binding proteins and the messages they carry. Nature reviews Molecular cell biology 2002, 3(3):195-205.
    30. Burd CG, Dreyfuss G: Synthesis of the translational apparatus is regulated at the translational level. Eur J Biochem 2000, 267:6321±6330.
    31. SALVADOR Z. TARUN, JR., SANDRA E. WELLS, JULIE A. DEARDORFF, SACHS AB: Translation initiation factor eIF4G mediates in vitro poly(A) tail-dependent translation. Proc Natl Acad Sci USA 1997, 94:9046±9051.
    32. Sandra E. Wells, Paul E. Hillner, Ronald D. Vale, Sachs AB: Circularization of mRNA by eukaryotic translation initiation factors. Molecular Cell 1998, 2:135–140.
    33. Motoaki Wakiyama, Imataka H, Sonenberg N: Interaction of eIF4G with poly(A)-binding protein stimulates translation and is critical for Xenopus oocyte maturation. Current Biology 2000, 10:1147–1150.
    34. Nicola K.Gray, Jeffery M.Coller, Kirsten S.Dickson, Wickens M: Multiple portions of poly(A)-binding protein stimulate translation in vivo. The EMBO Journal2000, 19:4723-4733.
    35. Hanh Le, Robert L. Tanguay, M. Luisa Balasta, Chin-Chuan Wei, Karen S. Browning, Anneke M. Metz, Dixie J. Goss, Gallie DR: Translation initiation factors eIF-iso4G and eIF-4B interact with the poly(A)-binding protein and increase its RNA binding activity. The Journal of biological chemistry 1997:16247-16255.
    36. Borman AnM, Michel YM, M.kean K: Biochemical characterisation of cap-poly(A) synergy in rabbit reticulocyte lysates the eIF4G-PABP interaction increases the functional affinity of eIF4E for the capped mRNA 5'-end. The Journal of biological chemistry 2000, 28(4068-4075).
    37. André Stutz, Béatrice Conne, Huarte J: Masking, unmasking, and regulated polyadenylation cooperate in the translational control of a dormant mRNA in mouse oocytes. Genes Dev 1998 12:2535-2548.
    38. Barbara Stebbins-Boaz, Quiping Cao, Cornelia H. de Moor, Raul Mendez, Richter JD: Maskin is a CPEB-associated factor that transiently interacts with elF-4E. Molecular Cell 1999, 4:1017–1027.
    39. Rebecca Hodgman, Joyce Tay, Mendez R, Richter JD: CPEB phosphorylation and cytoplasmic polyadenylation are catalyzed by the kinase IAK1Eg2 in maturing mouse oocytes. Development 2001, 128:2815-2822.
    40. Irina Groisman, Yi-Shuian Huang, Raul Mendez, Quiping Cao, Theurkauf W, Richter JD: CPEB, maskin, and cyclin B1 mRNA at the mitotic apparatus implications for local translational control of cell division. Cell 2000, 103:435–447.
    41. Marvin Wickens, David S. Bernstein, Kimble J, Parker R: A PUF family portrait 3'UTR regulation as a way of life. TRENDS in Genetics 2002, 18:150-157.
    42. Cameron Luitjens, Maria Gallegos, Kraemer B: CPEB proteins control two key steps in spermatogenesis in C. elegans. Genes Dev 2000, 14:2596-2609.
    43. Akira Nakamura, Reiko Amikura, Hanyu K, Kobayashi S: Me31B silences translation of oocyte-localizing RNAs through the formation of cytoplasmic RNP complex during Drosophila oogenesis. Development 2001, 128:3233-3242.
    44. Yung S. Lie, Macdonald PM: Translational regulation of oskar mRNA occurs independent of the cap and poly(A) tail in Drosophila ovarian extracts. Development 1999, 126:4989-4996.
    45. Ray-Yuan Chuang, Paul L. Weaver, Zheng Liu, Chang T-H: Requirement of the DEAD-Box protein ded1p for messenger RNA translation. Science 1997, 275:1468-1471.
    46. James E. Wilhelm, Jennifer Mansfield, Nora Hom-Booher, Shengxian Wang, Christoph W. Turck, Tulle Hazelrigg, Vale RD: Isolation of a ribonucleoprotein complex involved in mRNA localization in Drosophila oocytes. The Journal of cell biology 2000, 148:427–439.
    47. Quaresma AJ, Oyama S, Jr., Barbosa JA, Kobarg J: The acidic domain of hnRNPQ (NSAP1) has structural similarity to Barstar and binds to Apobec1. Biochemical and biophysical research communications 2006, 350(2):288-297.
    48. Zissimos Mourelatos, Linda Abel, Jeongsik Yong, Naoyuki Kataoka, Dreyfuss G: SMN interacts with a novel family of hnRNP and splicesomal proteins. The EMBO Journal 2001, 20:5443±5452.
    49. Liu HM, Aizaki H, Choi KS, Machida K, Ou JJ, Lai MM: SYNCRIP (synaptotagmin-binding, cytoplasmic RNA-interacting protein) is a host factor involved in hepatitis C virus RNA replication. Virology 2009, 386(2):249-256.
    50. Christophe Grosset, Chyi-Ying A. Chen, Nianhua Xu, Nahum Sonenberg, Helene Jacquemin-Sablon, Shyu* A-B: A mechanism for translationally coupled mRNA turnover interaction between the poly(A) tail and a c-fos RNA coding determinant via a protein complex. cell 2000, 103:29-40.
    51. Kim DY, Woo KC, Lee KH, Kim TD, Kim KT: hnRNP Q and PTB modulate the circadian oscillation of mouse Rev-erb alpha via IRES-mediated translation. Nucleic acids research 2010, 38(20):7068-7078.
    52. Burd CG, Swanson MS, Gorlach M, Dreyfuss G: Primary structures of the heterogeneous nuclear ribonucleoprotein A2, B1, and C2 proteins: a diversity of RNA binding proteins is generated by small peptide inserts. Proceedings of the National Academy of Sciences of the United States of America 1989, 86(24):9788-9792.
    53. Moran-Jones K, Grindlay J, Jones M, Smith R, Norman JC: hnRNP A2 regulates alternative mRNA splicing of TP53INP2 to control invasive cell migration. Cancer research 2009, 69(24):9219-9227.
    54. Fahling M, Mrowka R, Steege A, Martinka P, Persson PB, Thiele BJ: Heterogeneous nuclear ribonucleoprotein-A2/B1 modulate collagen prolyl 4-hydroxylase, alpha (I) mRNA stability. The Journal of biological chemistry 2006, 281(14):9279-9286.
    55. Ford LP, Wright WE, Shay JW: A model for heterogeneous nuclear ribonucleoproteins in telomere and telomerase regulation. Oncogene 2002, 21(4):580-583.
    56. Guha M, Tang W, Sondheimer N, Avadhani NG: Role of calcineurin, hnRNPA2 and Akt in mitochondrial respiratory stress-mediated transcription activation of nuclear gene targets. Biochimica et biophysica acta 2010, 1797(6-7):1055-1065.
    57. Guha M, Pan H, Fang JK, Avadhani NG: Heterogeneous nuclear ribonucleoprotein A2 is a common transcriptional coactivator in the nuclear transcription response to mitochondrial respiratory stress. Molecular biology of the cell 2009, 20(18):4107-4119.
    58. James R.Bischoff LA, Yingfang Zhu KM, Lelia Ng,, Brian Souza BS, Peter Flanagan FC, Charles Ginther, Clarence S.M.Chan, Mike Novotny DJS, D.Plowman G: A homologue of Drosophila aurora kinase is oncogenic and amplified in human colorectal cancers. The EMBO Journal 1998, 17:3052–3065.
    59. Liang Y, Shi SL, Li QF, Chen LY, Jing GJ, Tan GW, Wang SY, Wu FY: The localization of hnRNP A2/B1 in nuclear matrix and the aberrant expression during the RA-induced differentiation of human neuroblastoma SK-N-SH cells. Journal of cellular biochemistry 2011, 112(7):1722-1729.
    60. Passos DO, Quaresma AJ, Kobarg J: The methylation of the C-terminal region of hnRNPQ (NSAP1) is important for its nuclear localization. Biochemical and biophysical research communications 2006, 346(2):517-525.
    61. Quaresma AJ, Bressan GC, Gava LM, Lanza DC, Ramos CH, Kobarg J: Human hnRNP Q re-localizes to cytoplasmic granules upon PMA, thapsigargin, arsenite and heat-shock treatments. Experimental cell research 2009, 315(6):968-980.
    62. Michael Roshon, James V DeGregori, Ruley HE: Gene trap mutagenesis of hnRNP A2B1 a cryptic 3' splice site in the neomycin resistance gene allows continued expression of the disrupted cellular gene. BMC genomics 2003, 4:2:1-11.
    63. Bannai H, Fukatsu K, Mizutani A, Natsume T, Iemura S, Ikegami T, Inoue T, Mikoshiba K: An RNA-interacting protein, SYNCRIP (heterogeneous nuclear ribonuclear protein Q1/NSAP1) is a component of mRNA granule transported with inositol 1,4,5-trisphosphate receptor type 1 mRNA in neuronal dendrites. The Journal of biological chemistry 2004, 279(51):53427-53434.

    下載圖示 校內:2014-07-30公開
    校外:2014-07-30公開
    QR CODE