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研究生: 楊文賓
Yang, Wen-Bin
論文名稱: Sp1介導microRNAs的表現在肺癌進程中所扮演的角色
The role of Sp1-mediated microRNAs expression in lung cancer progression
指導教授: 洪建中
Hung, Jan-Jong
學位類別: 博士
Doctor
系所名稱: 生物科學與科技學院 - 生物資訊與訊息傳遞研究所
Insitute of Bioinformatics and Biosignal Transduction
論文出版年: 2014
畢業學年度: 103
語文別: 英文
論文頁數: 135
中文關鍵詞: Sp1肺癌miRNAmiR-182FOXO3CD44
外文關鍵詞: Sp1, Lung cancer, miRNA, miR-182, FOXO3, CD44
相關次數: 點閱:80下載:5
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  • 我們近年來的研究指出,Sp1的過量表現會促使肺癌細胞的增長,同時也抑制其轉移能力。在本研究中,我們發現Sp1的表現會去增加FOXO3的轉錄活性,然而其蛋白質的表現量卻是下降的。Sp1藉由增加miR-182的表現,進而與FOXO3 mRNA的3'端未轉譯區域結合,抑制其轉譯活性。當miR-182靜默時會抑制肺癌細胞的生長,但是能藉由增加N-cadherin的表現來增強癌細胞的侵略與遷移能力。在miR-182靜默之細胞株抑制FOXO3的表現能部分逆轉miR-182所造成的細胞侵略影響,証明了miR-182促使肺癌細胞的生長與轉移是藉由調控FOXO3的表現所導致。我們也觀察到一群與癌細胞轉移相關之基因,像是ADAM9、CDH9和CD44的表現量,也隨著miR-182的下降其表現量有增加的情形。此外,我們發現Sp1可能透過調控一群miRNAs (miR-106a, miR-150, miR-182, miR-183*, miR-193a-5p and miR-212-5p) 的表現進而透過CD44的3'端未轉譯區域來抑制其表現,Sp1和CD44的表現在臨床關聯性上也呈現高度負相關的情形,CD44表現量的增加會促使肺癌細胞具有高度遷移與侵略能力。這些發現可以更加證明Sp1具有抑制肺癌轉移的能力。最後,我們進行了染色質免疫沉澱結合次世代定序與小片段RNA 定序技術,發現了50個Sp1可能直接調控的miRNAs,功能分析也指出這些miRNAs參與在細胞凋亡和細胞生長的過程中。綜合上述,我們的研究成果對於Sp1如何調控肺癌發展提供了一個新的見解,在肺癌發展的早期,Sp1藉由刺激miR-182的表現進而降低FOXO3的表現,這樣的調控導致腫瘤的生長。然而在晚期,Sp1和Sp1所調控的miRNAs表現量下降,於是FOXO3和CD44的表現量增加,進而導致肺腫瘤的轉移,由此突顯出miRNAs的生合成在癌症中的重要性。

    Our recent study indicated that the expression of Sp1 at a high level enhances the proliferation of lung cancer cells, but represses the metastatic activity of lung cancer. In this study, we found that the transcriptional activity of the FOXO3 was increased, but its protein levels decreased following Sp1 expression. Further studies revealed that Sp1 increased the expression of the miRNA, miR-182, which was then recruited to the 3'-untranslated region of FOXO3 mRNA to silence its translational activity. Knockdown of miR-182 inhibited lung cancer cells growth, but enhanced the invasive and migratory abilities of these cells through increased N-cadherin expression. The repression of FOXO3 expression in the miR-182 knockdown cells partially reversed this effect, suggesting that miR-182 promotes cancer cell growth and inhibits cancer metastatic activity by regulating the expression of FOXO3. The expression of several cancer metastasis-related genes such as ADAM9, CDH9 and CD44 was increased following miR-182 knockdown. Furthermore, we found that Sp1 may regulate the expression of a cluster of miRNAs (miR-106a, miR-150, miR-182, miR-183*, miR-193a-5p and miR-212-5p) to negatively regulate CD44 through 3'-UTR regulation. Clinical relevance indicated that Sp1 expression is negatively correlated with CD44 expression. Enhancement of CD44 expression promoted lung cancer cell migration and invasion abilities. These findings could verify why Sp1 suppresses lung cancer metastasis. Finally, we performed chromatin immunoprecipitation coupled to next-generation sequencing combining with small RNA sequencing technology to identify 50 of mature miRNAs which were potential directly regulated by Sp1. Functional analysis also indicated that these miRNAs were involved in apoptotic process and cell proliferation. In conclusion, our findings provide a new insight of Sp1 regulated lung cancer progression through miRNAs regulation. In the early stages of lung cancer progression, Sp1 stimulates miR-182 expression, which in turn decreases FOXO3 expression. This stimulates proliferation and tumor growth. In the late stages, Sp1 and Sp1-regulated miRNAs decline, thus increasing FOXO3 and CD44 expression, which leads to lung metastasis, thereby highlighting the importance of miRNAs biosynthesis in cancer.

    摘要 i Abstract ii 誌謝 iv Contents vi Abbreviations x Chapter 1. Introduction I. Post-transcriptional regulation 1 II. Lung cancer 3 III. miRNAs in lung cancer 4 IV. Specificity protein 1 (Sp1) 5 V. Involvement of Sp1 in cancer development 5 VI. Sp1-mediated miRNAs biogenesis 8 VII. MicroRNA-182 (miR-182) 9 VIII. Research Aims and significance of the current study 9 Chapter 2. Materials and methods I. Materials 11 II. Methods 19 Chapter 3. Results I. Identification of potential Sp1-regulated miRNAs in lung cancer 28 II. Sp1 regulates miR-182 expression 29 III. miR-182 increases lung tumor growth 30 VI. Sp1 inhibits FOXO3 expression by inducing miR-182 expression 31 V. miR-182 inhibits lung cancer metastasis activity 33 VI. Sp1 inhibits CD44 expression through 3-UTR regulation 35 VII. CD44 enhances lung cancer cell migration and invasion abilities 37 Chapter 4. Discussion I. Identification of a regulatory mechanism for Sp1-mediated repression through miR-182 38 II. Sp1-regulated a cluster of miRNAs is involved in lung cancer metastasis 41 III. Large-scale screening of Sp1-promoter interactions by ChIP coupled to next-generation sequencing 42 IV. Identification of Sp1-regulated miRNAs by combining the techniques of ChIP-Seq and small RNA-Seq 44 V. Future application in human lung cancer therapy 45 Chapter 5. Conclusion 47 Chapter 6. References 48 Tables and Figures Table 1. miRNAs differentially expressed between lung cancer and normal lung tissues, which were potentially regulated by Sp1. 62 Table 2. Putative Sp1-mediated miRNAs targeting CD44. 63 Figure 1. Sp1 regulates miR-182 expression. 64 Figure 2. Transcriptional activation by binding of Sp1 to miR-182 promoter sequence. 65 Figure 3. The miR-182 level correlates to Sp1 level. 67 Figure 4. Bioinformatics analysis reveals potential target genes of miR-182. 68 Figure 5. miR-182 regulates cell cycle progression. 69 Figure 6. Depletion of miR-182 inhibits lung tumor growth. 70 Figure 7. Regulation of FOXO3 by miR-182 and Sp1. 72 Figure 8. Sp1 negatively regulates FOXO3 expression. 73 Figure 9. Sp1 is involved in both transcriptional and post-transcriptional regulation of FOXO3. 74 Figure 10. Depletion of miR-182 alters cell morphology. 76 Figure 11. miR-182 attenuates lung cancer cell metastasis. 77 Figure 12. Depletion of miR-182 increases the expression of migration-associated genes. 79 Figure 13. Sp1 inhibits CD44 expression through 3'-UTR regulation. 81 Figure 14. Inverse correlation between Sp1 and CD44 mRNA level and protein levels in human lung cancer tissue. 82 Figure 15. CD44 enhances lung cancer cell migration and invasion abilities. 83 Figure 16. Proposed model. 84 Appendixes 86 Curriculum vitae 108 Publications (First author) 110

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