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研究生: 劉詠儀
Lao, Weng-I
論文名稱: 薄膜式醣晶片的發展及應用
Development and Application of Carbohydrate Membrane Array
指導教授: 張權發
Chang, Chuan-Fa
學位類別: 碩士
Master
系所名稱: 醫學院 - 醫學檢驗生物技術學系
Department of Medical Laboratory Science and Biotechnology
論文出版年: 2009
畢業學年度: 97
語文別: 中文
論文頁數: 106
中文關鍵詞: 薄膜晶片醣類高通量篩選
外文關鍵詞: high throughput screening, glycan, membrane array
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  • 生物體內細胞表面醣類分子與蛋白質間相互作用具有很多重要的功能,包括調控細胞分化、細胞附著、免疫反應、蛋白質運輸、腫瘤細胞轉移及微生物感染等重要的生理功能。這些功能皆透過特定的凝集素、抗體或蛋白質與細胞表面上醣蛋白或醣脂質末端的醣類分子發生交互作用所引發的。過去發展許多技術用於蛋白質與醣類間交互作用的研究上,例如酵素結合免疫吸附分析、平衡透析、表面等離子共振技術、等溫滴定微量熱法、親和性層析及醣類晶片。其中最為成功的技術則是醣類晶片,它的原理是透過疏水作用力、biotin與streptavidin作用或共價鍵等將醣類分子固定在玻璃、金屬或矽等材質的表面。本研究目的是建立薄膜式醣類晶片平台來偵測凝集素、蛋白質和病毒與醣類間作用的關係。本論文使用了88種biotin-PAA(polyacrylamide)-sugar,分別測試透過streptavidin、抗biotin抗體或直接固定在薄膜上,研究中使用了三種不同的薄膜:包括西方墨點法所用的轉漬膜PVDF、DNA晶片常用的帶正電尼龍膜及適用於蛋白質晶片的UltraBind薄膜;結果的觀察則是透過標記有鹼性磷酸酶的凝集素或抗體來進行。本研究結果顯示biotin-PAA-sugar能成功地透過streptavidin固定在UltraBind薄膜上,而最適用於本薄膜的填塞緩衝液則是含有酪蛋白的TBST裡。透過18個已知凝集素及4個抗醣類抗體測試,結果分析符合過去研究的結果。再來是應用這平台分析人類和禽類的感冒病毒在晶片上的結合圖譜,我們測試了臨床分離的流感病毒16株B型、1株A型及2株禽類的H6N1,結果發現禽類流感病毒主要與alpha 2-3鏈結的唾液酸結合,而人類流感則是與alpha 2-6鏈結的唾液酸結合為主,此外我們也發現了毒性較高的禽類流感病毒與醣類結合能力較強,因此推測禽類感冒病毒其致病能力與結合醣類能力有關聯。

    Protein-carbohydrate interactions involved in many important biological processes including cell differentiation, adhesion, immune response, protein trafficking and tumor metastasis. All of these functions occur through the interaction between glycans on glycoprotein or glycolipid displayed on cell surfaces with specific lectins, antibodies, or proteins. Many techniques have been developed to study protein-carbohydrate interactions including enzyme-linked lectin sorbent assay (ELLSA), equilibrium dialysis, surface plasmon resonance, isothermal titration calorimetry, frontal affinity chromatography (FAC) and carbohydrate microarray. Carbohydrate microarray, which glycans are immobilized on the surface of glass or silicon through hydrophobic interactions, biotin-streptavidin interactions or covalent bonding, is one of the most successful approaches. Here, we established a carbohydrate membrane array platform to explore protein-carbohydrate interaction of lectins, proteins and microorganisms. Eighty-eight biotin conjugated polyacrylamide (PAA) based glycan epitopes were immobilized directly or through streptavidin/anti-biotin antibody on three membranes (PVDF, nylon membrane or UltraBind membrane). The binding signal was observed by alkaline phosphatase conjugated on lectins or antibodies. It showed that PAA based glycan epitopes could be immobilized on UltraBind membranes through streptacidin and casein in Tris buffer saline (TBS) with 0.05% Tween 20 was the best buffer for blocking. The binding profiles of eighteen known lectins and four anti-Lewis sugar antibodies were analyzed and the results were comparable to literature. In addition, this platform was applied to investigate the carbohydrate binding profiles of influenza virus. The profiles of twenty clinical isolates of influenza B viruse and avian influenza viruse (H6N1) were examined and the results showed that avian viruse selectively bound with alpha 2-3 linked sialosides (sialylated glycans) and human viruse selectively bound with alpha 2-6 linked sialosides, respectively. Furthermore, the binding strength of high virulence avian influenza virus was obviously stronger than low one. The finding has opened a new direction for inspecting the relationship between the carbohydrate epitopes and the avian flu.

    目錄 摘要 I Abstract II 誌謝 III 目錄 IV 表目錄 VI 圖目錄 VII 緒論 1 醣類分子與蛋白交互作用 1 醣類晶片的種類及製作 2 醣類與病毒細菌的交互作用 3 流行性感冒病毒的介紹 4 研究目的 7 研究架構 7 材料與方法 8 材料 8 測試醣受質不同濃度及streptavidin不同濃度的晶片製作 9 醣晶片與不同濃度帶鹼性磷酸酶標記的凝集素WGA測試結合反應 10 測試醣的固定方式及不同材質的薄膜晶片製作 10 三種不同薄膜的醣晶片與不同濃度帶鹼性磷酸酶標記的凝集素WGA結合反應測試 11 醣晶片製備(54種) 11 各類緩衝液的結合反應 12 醣晶片製備(88種) 13 醣晶片與帶鹼性磷酸酶標記的凝集素進行結合反應 13 醣晶片與凝集素及相應抗體進行結合反應 14 醣晶片與帶有FITC標記的凝集素進行結合反應 14 醣晶片與醣類抗體進行結合反應 15 流感醣晶片製備 16 醣晶片與流行性感冒病毒進行結合反應 16 晶片結合反應結果判讀 17 結果 18 利用不同濃度帶鹼性磷酸酶標記的凝集素WGA,測試晶片上醣受質的不同濃度及streptavidin不同濃度的結果 18 利用不同濃度帶鹼性磷酸酶標記的凝集素WGA,測試固定醣的方式及不同材質薄膜晶片的結果 18 測試不同緩衝液結合反應的結果 21 測試本研究所使用的相關抗體與醣類晶片有否發生非專一性結合的情況 22 88種醣類晶片與帶鹼性磷酸酶標記的凝集素結合反應的結果 22 凝集素及相應抗體結合反應的結果 23 帶有FITC標記的凝集素結合反應的結果 25 88種醣類晶片與醣類抗體結合反應的結果 26 感冒病毒醣類晶片與感冒病毒結合反應的結果 26 討論 28 製備醣類晶片討論 28 相關抗體與醣類晶片發生非專一性結合的討論 28 凝集素在54種醣類晶片與88種醣類晶片結合得到結果的差異 28 凝集素以不同方式與88種醣類晶片結合得到結果的差異 29 凝集素在88種醣類晶片偵測得到的結果與其特性相異 30 流感病毒偵測得到的結果討論 31 結論 32 參考文獻 33 自述 106

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