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研究生: 陳彥如
Chen, Yen-Ju
論文名稱: 探討Aurora-A五端非轉譯區的核醣體結合區之轉譯調控機制
Studying the IRES-dependent translational regulation of Aurora-A mRNA
指導教授: 洪良宜
Hung, Liang-Yi
學位類別: 碩士
Master
系所名稱: 生物科學與科技學院 - 生物資訊與訊息傳遞研究所
Insitute of Bioinformatics and Biosignal Transduction
論文出版年: 2014
畢業學年度: 102
語文別: 中文
論文頁數: 71
中文關鍵詞: Aurora-A核醣體結合區hnRNP Q1hnRNP A2/B1
外文關鍵詞: Aurora-A, IRES, hnRNP Q1, hnRNP A2/B1
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  • 實驗室先前的研究發現,大腸直腸癌細胞在EGF刺激之下會透過轉譯調控增加Aurora-A 蛋白的表現(Journal of Cellular and Molecular Medicine 2010; 14(6B): 1520-1531)。本論文進一步去分析Aurora-A 五端非轉譯區(5’untranslated region, 5’UTR)的轉譯調控機制。實驗室先前透過RNA immunoprecipitation (RNA- IP)並結合蛋白質體分析,發現RNA結合蛋白hnRNP Q1會結合上Aurora-A mRNA五端非轉譯區,且會增加Aurora-A mRNA 的轉譯能力。透過 in vivo translational assay發現,無論是在Cap-dependent 或是 Cap- independent的核醣體結合區(internal ribosome entry sites, IRESs), hnRNP Q1皆能顯著性的增加Aurora-A mRNA轉譯調控的效率。有趣的是,Aurora-A mRNA五端非轉譯區的IRES轉譯活性是有細胞週期依賴性的,而Cap-dependent的轉譯活性則無此現象。此外,透過建立hnRNP Q1上與Aurora-A mRNA結合位缺失的片段,發現其對於Aurora-A mRNA的轉譯調控能力相對於完整的hnRNP Q1有降低的情形,證明hnRNP Q1與Aurora-A mRNA的結合對於其轉譯調控是必要的。另一方面,hnRNP A2/B1是另一個會與Aurora-A mRNA五端非轉譯區結合的RNA 結合蛋白。實驗結果發現,hnRNP A2/B1對於Aurora-A mRNA的轉譯調控作用是抑制性的,且同樣有調控IRES轉譯活性及細胞週期依賴性的情形。進一步分析Aurora-A mRNA 3’UTR是否有參與其轉譯調控,結果顯示hnRNP Q1對於Aurora-A mRNA 3’UTR沒有影響。綜合以上結果,本研究得知hnRNP Q1和 hnRNPA2/B1是兩個重要的Aurora-A 5’UTRs轉譯調控因子,並且參與具有Aurora-A mRNA IRES的轉譯調控和細胞週期依賴性的表現。

    By RNA immunoprecipitation (IP) followed by proteomic analysis, we found that the RNA-binding protein hnRNP Q1 was a potential trans-acting factor for translational regulating of Aurora-A mRNA. In vivo translation assay demonstrated that hnRNP Q1 increased the translational efficiency of Aurora-A mRNA in both Cap-dependent and Cap-independent manners. The Aurora-A 5’-UTR-binding domain of hnRNP Q1 was verified and the effect of Aurora-A mRNA translational regulation was under investigation. Interestingly, our results suggested that the IRES activity of Aurora-A mRNA 5’UTR, but not the Cap-dependent translational activity, was under cell-cycle regulated. In addition to hnRNP Q1, another potential RNA binding protein hnRNP A2/B1 was also found to be involved in regulating the translation of Aurora-A mRNA. HnRNP A2/B1 was also involved in the IRES- and cell cycle-dependent regulatory manner of Aurora-A mRNA. Our re sults suggest that hnRNP Q1 and hnRNPA2/B1 are two important regulatory factors that bind with Aurora-A 5’UTRs and regulate the translational efficiency of Aurora-A mRNA.

    中文摘要I 英文摘要II 誌謝IV 目錄VI 圖目錄XI 附錄目錄XIII 縮寫簡索表XIV 第一章 緒論1 1-1.前言1 1-2.Aurora-A Kinase2 1-2.1 Aurora Kinase家族2 1-2.2 Aurora-A Kinase的命名3 1-2.3 Aurora-A Kinase在細胞週期的調控3 1-3.Aurora-A 過量表現和癌症之間的關聯性5 1-4.真核生物轉譯起始作用機制6 1-4.1典型的Cap-dependent轉譯調控6 1-4.2 Internal ribosome entry sites (IRES)的轉譯調控7 1-5.mRNA結合蛋白(RNA-binding proteins)與轉譯調控機制8 1-6.HnRNP蛋白家族(hetereterogeneous nuclear ribonucleoproteins,hnRNPs protein family)9 1-6.1 Heterogeneous nuclear ribonucleoproteins9 1-6.2 Heterogeneous nuclear ribonucleoprotein Q(HnRNP Q)10 1-6. 3 Heterogeneous nuclear ribonucleoprotein A2/B1 (HnRNPA2/B1)11 1-7.Aurora-A mRNA之同源異構物12 1-8.研究動機12 1-9.研究目的13 第二章 實驗材料與方法15 2-1細胞株培養15 2-2細胞液抽取 (Total cell lysate)16 2-3蛋白質濃度之測定17 2-4西方墨點法(Western blotting)17 2-5質體轉殖(Transformation)21 2-6抽取小量質體(Plasmid DNA Mini-preparation)22 2-7抽取大量質體(Plasmid DNA Midi-Preparation)23 2-8暫時性轉殖感染(Transient transfection)24 2-9細胞內轉譯活性測定(In vivo translation assay)24 2-10全量RNA的抽取25 2-11反轉錄-聚合酶連鎖反應(Reverse-transcription Polymerase Chain Reaction)26 2-12即時定量聚合酶連鎖反應(Quantitative Real-time PCR)27 2-13細胞週期同步化(cell cycle synchronization)28 2-14GFP-Q1RBD2.3質體構築29 第三章 結果33 3-1分析Aurora-A mRNA 5’UTR的轉譯效率33 3-1.1典型的五端轉譯調控 – Cap-dependent轉譯調控分析33 3-1.2加入Aurora-A mRNA 3’UTR(3’-untranslated Region)分析其 Cap-dependent轉譯調控34 3-1.3 IRES的轉譯調控34 3-2 IRES轉譯調控具有細胞週期依賴性的現象35 3-3 過量表現GFP-hnRNP Q1會增加Aurora-A 5’UTR的IRES轉譯效率36 3-4 GFP-hnRNPQ1增加Aurora-A 5’UTR IRES的轉譯效率具有細胞週期依賴 性37 3-5 將hnRNP Q1上會與Aurora-A 5’UTR結合的區段去除會降低轉譯調控的能 力38 3-6 過量表現hnRNP A2/B1-Flag會降低Aurora-A 5’UTR的轉譯效率38 3-7 過量表現hnRNPA2/B1-Flag會降低Aurora-A 5’UTR的IRES轉譯效率39 3-8 過量表現hnRNPA2/B1-Flag會降低Aurora-A mRNA 5’UTR受細週期調控 的IRES轉譯效率40 3-9 總結40 第四章 討論42 4-1探討Aurora-A mRNA 5’UTR和3’UTR轉譯調控差異性42 4-2探討trans-acting factor在Aurora-A mRNA 5’UTR轉譯調控中所扮演 的角色44 4-3總結與未來方向46 附圖47 參考文獻62

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