| 研究生: |
蘇郁清 Su, Yu-Chin |
|---|---|
| 論文名稱: |
基因選殖神經壞死病毒非結構基因B2及其功能之探討 Cloning and characterization of NNV B2 function |
| 指導教授: |
洪健睿
Hong, Jiann-Ruey |
| 學位類別: |
碩士 Master |
| 系所名稱: |
生物科學與科技學院 - 生物科技研究所 Institute of Biotechnology |
| 論文出版年: | 2005 |
| 畢業學年度: | 93 |
| 語文別: | 中文 |
| 論文頁數: | 103 |
| 中文關鍵詞: | 凋亡基因 、非結構性蛋白B2 、神經壞死病毒 、粒線體 、小片段干擾性RNA |
| 外文關鍵詞: | apoptotic gene, mitochondrion, siRNA, non-structure protein B2, Nervous Necrosis Virus |
| 相關次數: | 點閱:133 下載:1 |
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細胞常藉由調控程式化凋亡來清除被病毒感染之宿主細胞。神經壞死病毒感染宿主細胞時,已知可引起細胞凋亡,但病毒如何促進或抑制宿主凋亡之機制尚不清楚。利用西方轉印免疫實驗中,首次發現在病毒感染後24 小時,B2 蛋白質(8.3 KD)開始持續表現。為探討此神經壞死病毒B2 蛋白所扮演之功能,我們從病毒次基因體RNA3 中,選殖出此非結構性蛋白基因B2。B2基因全長含有228 個核苷酸,可轉譯出75 個胺基酸。若將B2基因接到黃色螢光基因(EYFP)後面形成融合基因,並轉染至細胞內,表現B2 蛋白會進入粒線體內。如果將B2基因短暫的表現於石斑魚肝臟細胞株(GL-av)內,可誘發細胞凋亡。同時,當我們短暫表現B2 基因與抗斑馬魚凋亡基因Bcl-xL 及Mcl-1a 時,則可減緩B2所誘發之細胞凋亡現象。此外,當利用基因knockdownz 方式之小片段干擾性RNA(siRNA)可有效阻斷B2 蛋白之表現,則可減少細胞凋亡及減緩病毒複製。由本論文之研究,證實B2 蛋白是屬早期表現之粒線體蛋白。其功能則與誘發宿主細胞凋亡及病毒複製與蛋白表現有密切相關。希望此研究之發現,能對防治或預防神經壞死病毒所誘發之疾病有所助益。
Apoptosis is a genetically-controlled preprogrammed event which eliminates cells during viral infection with host cells. Recently,betanodavirus-induced host cell death through apoptosis have been reported, but virus how to involved in regulate the host cell death is still a few understood. We found that B2 protein was expression occurred at 24 h post-infection (p.i.). So, we interest to know its function, then B2 gene be cloned and characterized was done. The betanodavirus TN1 strain B2 cDNA is 228 nucleotides long, encoding a polypeptide of 75 amino acids that protein size about 8.3 kDa in grouper liver (GL-av) cells. EYFP as a reporter gene was used for tracing B2 protein that also found localized in mitochondria in GL-av cell after 24 h p.i. When overexpression of B2 gene that significantly induces GL-av apoptotic cell death, but also prevents cell death by extra expression of Bcl-2 member Bcl-XL and Mcl-1a, which were cloned from zebrafish. Moreover, siRNA approaches are used for knockdowned B2 expression in transient and stable expression cell line in GL-av cell, which can enhances the cell viability up to 30% at 24 h p.i. and reduces the lose of mitochondria membrane potential during NNV infection up to 20% from 24 h to 72 h p.i., respectively. Taken results suggest that B2 is an early expression gene which may play an important role on either induces the host post-apoptotic necrosis or may regulate the viral replication. This finding may thus provide an important insight into the control or prevention of nodavirus-induced diseases.
Adams J. M., Cory S. The Bcl-2 protein family: arbiters of cell survival.
Science 281(5381): 1322-1326. (1998).
Schinzel A., Kaufmann T., Borner C. Bcl-2 family members: intracellular
targeting, membrane-insertion, and changes in subcellular localization.
Biochim. Biophys. Acta (Review) 1644: 95–105. (2004).
Anne R., Richard C. M., Philip E. B. Viruses and apoptosis. Annu. Rev.
Microbiol. 53: 577-628. (1999).
Bae J., Leo C., Hsu S., Hsueh A. Mcl-1S, a splicing variant of the antiapoptotic Bcl-2 family member Mcl-1, encodes a proapoptotic protein possessing only the BH3-domain. J. Biol. Chem. 275(33): 25255-261. (2000).
Brown D. G., Sun X. M., Cohen G. M. Dexamethasone-induced apoptosis
involves cleavage of DNA to large fragments prior internucleosomal
fragmentation. J. Biol. Chem. 268: 3037-3039. (1993).
Boonyaratpalin S., Supamattaya K., Kasornchandra J., Hoffmann R. W.,
Picona - like virus associated with mortality and a spongious encephalopathy
in grouper Epinephelus malabaricus. Dis. Aqua.t Org. 26: 75-80. (1996)
Delsert C., Morin N., Cpmps M. A fish encephalitis virus that differs from
other nodaviruses by its capsid protein processing. Arch. Virol. 142: 2359-2371.(1997)
Cerutti H. RNA interference: traveling in the cell and gaining functions?
Trends Genet. 19(1) : 39-46. (2003)
Albarino C., Lance D. Eckerle L., Ball C. The cis-acting replication signal at
the 3` end of Flock House virus RNA2 is RNA3-dependent. Virology 311:
181-191. (2003)
Chao D. T., Korsmeyer S. J. BCL-2 family: regulators of cell death. Annu. Rev.
Immunol. 16: 395-419. (1998).
Tan C., Huang B., Chang S. F., Ngoh G. H., Munday B., Chen S. C., Kwang J.
Determination of the complete nucleotide sequences of RNA1 and RNA2 from
greasy grouper nervous necrosis virus, Singapore strain. J. Gen. Virol. 82:
647-653. (2001)
Daniela C., Li H., Kohn J. R. Functional siRNA expression from transfected
PCR products. RNA 8: 1454-1460. (2002)
Desagher S., Martinou J. C. Mitochondria as the central control point of
apoptosis. Trends Cell. Biol. 10(9): 369-377. (2000).
Eick D., Hermeking H. Viruses as pacemakers in the evolution of defence
mechanisms against cancer. Trends Genet. 12: 4-6. (1996).
Eleouet J. F. , Druesne N., Chilmonczyk S., Monge D., Dorson M., Delmas B.
Comparative study of in-situ cell death induced by the viruses of viral
haemorrhagic septicaemia (VHS) and infectious pancreatic necrosis (IPN) in
rainbow trout. J. Comp. Pathol. 124(4): 300-7. (2001).
Essbauer S., Ahne W. The epizootic haematopoietic necrosis virus (Iridoviridae)
induces apoptosis in vitro. J.Vet.Med. B Infect. Dis.Vet.Public Health 49(1):
25-30. (2002).
Fire, A. Potent and specific genetic interference by double-stranded RNA in
caenorhabditis elegans. Nature 391: 806-811 (1998)
Green D. R., Reed J. C. Mitochondria and apoptosis. Science 281(5381):
1309-1312. (1998).
Guido K., Bruno D., Michele R. R. The mitochondrial death/life regulator in
apoptosis and necrosis. Annu. Rev. Physiol. 60: 619-42. (1998).
Guo Y. X., Wei T., Dallmann K., Kwang J. Induction of caspase-dependent
apoptosis by betanodaviruses GGNNV and demonstration of protein alpha as
an apoptosis inducer. Virology 308(1): 74-82. (2003).
Hannon G. J. RNA interference. Nature 418: 244-251 (2002)
Harrington E. A., Bennett M. R., Fandini A. , Evan G. I. Modulation of
myc–induced apoptosis by specific cytokines. EMBO J.13: 3286-3295. (1994).
Hasuwa H. , Kaseda K., Einarsdottir O., Okabe M. Small intergering RNA and
gene silencing in transgenic mice and rats. FEBS Letters 532: 227-230. (2002)
Hong J. R. , Wu J. L. VP5, a novel anti-apoptosis gene of the Bcl-2 family,
regulates Mcl-1 viral protein expression .Virology 295(2): 217-29. (2002).
Hong J. R. , Wu J. L. Induction of apoptosis death in cell via Bad gene
expression by infectious pancreatic necrosis virus infection. Cell Death Differ.
9: 113-124. (2002).
Hong J. R. , Wu J. L. Molecular regulation of cellular apoptosis by fish
infectious pancreatic necrosis virus infection.Virology (Review) 2: 151-160.
(2002).
Li H., Li W. X., Ding S. W. Induction and suppression of RNA silencing by an
animal virus. Science 296: 1319-1321. (2002)
Imajoh M, Sugiura H, Oshima S. Morphological changes contribute to
apoptotic cell death and are affected by caspase-3 and caspase-6 inhibitors
during red sea bream iridovirus permissive replication. Virology 322(2):
220-30. (2004).
Kerr J. F. R. Neglected pooprtunities in apoptosis research. Trends Cell. Biol.
5: 55-57. (1995).
Kerr J. F. R., Wyllie A. H., Currie A. R. Apoptosis : a basic biological
phenomenon with wide ranging implications in tissue kinetics. Br.J. Cancer 26:
1790-1794. (1972).
Ball A. L. Nodavirus RNA Recombination. Virology 8: 95-100. (1997)
Eckerle L. D., Albarino C. G., Ball L. A. Flock House virus subgenomic RNA3
is replicated and its replication correlates with ransactivation of RNA2.
Virology 317: 95-108. (2003)
Dalla V. L., Negrisolo E., Patarnello P., Zanella L., Maltese C., Bovo G.,
Colombo L. Sequence comparison and phylogenetic analysis of fish
nodaviruses based on the coat protein gene. Arch Virol 146: 1125-1137. (2001)
Lee Y. The nuclear RNase III Drosha initiates microRNA processing. Nature
425: 415-419 (2003)
Scherer L. J., Rossi J. Approaches for the sequence – specific knockdown of
mRNA. Nature Biotec. 21: 1457-1465. (2003)
Karbowski M. , Youle R. J. Dynamics of mitochondrial morphology in healthy
cells and during apoptosis. Cell Death and Differentiation 10: 870-880. (2003)
Miyagishi M., Taira K. U6 promoter-driven siRNAs with four uridine 31
overhangs efficiently suppress targeted gene expression in mammalian cells.
Nature biotec. 19: 497-500. (2002)
Wetering M. V .D. , Oving I., Fong M., Brantjes H., Leenen D.V., Holstege
C.P., Brummelkamp T. R., Agami R., Clevers H. Specific inhibition of gene
expression using a stably integrated, inducible small – interfering – RNA
vector. EMBO reports 4: 609-615. (2003)
Carmell M. A., Zhang L., Conklin D. S., Hannon G. J., Rosenquist T. A.
Germline transmission of RNAi in mice. Nature Structural Biology 10: 91-92.
(2003)
Arimoto M., Sato J., Maruyama K., Mimura G., Furusawa I. Effect of chemical
and physical treatments on the inactivation of striped jack nervous necrosis
virus. Aquaculture 143: 15-22. (1996)
Mori K. I., Nakai T., Muroga K., Arimoto M., Mushiake K., Furusaea I.
Properties of a new virus belonging to nodaviridae found in larval striped jack
(Pseudocaranx dentex) with nervous necrosis. Virology. 187: 368-371. (1992)
Mori K. I., Nakai T., Nagahara M., Muroga K., Mekuchi T., Kanno T. A viral
disease in hatchery - reared larvae and juveniles of redspotted grouper. Gyobyo
kenkyu. 26: 209-210. (1991)
Munday B. L., Nakai T., Nguyen H. D. Antigenic relationship of the picorna -
like virus of larval barramundi, lates calcarifer Bloch to the nodavirus of larval striped jacj, pseudocaranx dentex. Aust Vet J. 71: 384-385. (1994)
Muroga K. Viral , bacterial disease in larval and juvenile marine fish and
shellfish: a review. Fish Pathol. 30: 71-85. (1995)
Nishizawa T., Furuhashi M., Nagai T., Nakai T., Muroga K. Genomic
classification of fish nodaviruses by molecular phylogenetic analysis of the
coat proteingene. Appl Environ Microbiol 63(4):1633-6. (1997)
Oldstone M. B. A. How viruses escape from cytotoxic T lymphocytes :
molecular parameters and players. Virology 234: 179-185. (1997).
Kahana R., Kuznetzova L., Rogel A., Shemesh M., Hai D., Yadin H., Stram Y.
Inhibition of foot-and-mouth disease virus replication by small interfering
RNA. Journal of General Virology 85: 3213–3217. (2004)
Ruvkun G. Glimpese of tiny RNA world. Science 294: 797-799 (2001)
Samali A., Gorman A. M., Cotter. G. Apoptosis-he story so far-.Experientia.
52(10-11): 933-941. (1996).
Hammond S.M., Boettcher S., Caidy A. A., Kobayashi R., Hannon G. J.
Argonaite2, a link between genetic and biochemical analyses of RNAi. Science
293: 1146-1150. (2001)
Kapadia S. B., Andersen A. B., Chisari F. V. Interference of hepatitis C virus
RNA replication by short interfering RNAs. PNAS 100: 2014-2018. (2003)
Sharp P. A. RNA interference-2001. Genes Dev. 15: 485-490 (2001)
Bass B. L. Double-stranded RNA as a template for gene silencing. Cell 101:
235-238 (2002)
Chi S. C., Lin S. C., Su H. M., Hu W. W. Temperature effect on nervous
necrosis virus infection in grouper cell line and in grouper larvae. Virus
Research 63: 107-114. (1999)
Stark G. R., Ian M. K., Bryan R. G. W., Robert H. S. , Robert D. S. How cells
respond to interferons. Annu. Rev. Biochem. 67:227-64. (1998)
Yokota T., Sakamoto N., Enomoto N., Tanabe Y., Miyagishi M., Maekawa S.,
Yi L., Kurosaki M., Taira K., Watanabe M., Mizusawa H. Inhibition of
intracellular hepatitis C virus replication by synthetic and vector – derived
small interfering RNAs. EMBO reports 4: 602-608. (2003)
Thornberry N. A., Lazebnik Y. Caspases: enemies within. Science 281(5381):
1312-1316. (1998).
Nishizawa T., Takano R., Muroga K. Mapping a neutralizing epitope on the
coat protein of striped jack nervous necrosis virus. J. Gen. Virol. 80:
3023-3027. (1999)
Tuschl T. Expanding small RNA interference. Nat. Biotechnol.20: 446-448.
(2002)
Vaux D.L., Strasser A. The molecular biology of apoptosis. Pro. Nat. Acad. Sci.
USA 933: 2239-2244. (1996).
Bitko V., Musiyenko A., Shulyayeva O., Barik S. Inhibition of respiratory
viruses by nasally administered si RNA. Nat. med. 11: 50-55. (2005)
Voinnet O. RNA silencing as a plant immune system against viruses. TRENDS
in Genetics 17: 449-459 (2001)
Li W. X., Li H., Lu R., Li F., Dus M., Atkinson P., Brydon E.W.A., Johnson K.
L., Garcia-Sastre A., Ball L. A., Palese P., Ding S. W. Interferon antagonist
proteins of influenza and vaccinia viruses are suppressors of RNA silencing.
PNAS 101: 1350-1355. (2004)
Yoshikoshi K., Inoue K. Virus nervous necrosis in hatchery-reared larve and
juveniles of Japanase parrotfish, Oplegnathus fasciatus . J. fish Dis. 13: 69-77.(1990).
Zamore P. D., Tuschl T, Sharp P. A., Bartel D. P. RNAi: double-stranded RNA
directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals.
Cell 101: 25-33 (2000)