簡易檢索 / 詳目顯示

研究生: 羅窈安
Lo, Yao-An
論文名稱: 研究USP24抑制劑在化療誘導而產生抗藥性的肺癌細胞中所造成的影響
Studying the effect of novel USP24 inhibitors on chemotherapy-induced drug-resistant lung cancer cells
指導教授: 洪建中
Hung, Jan-Jong
共同指導教授: 呂增宏
Leu, Tzeng-Horng
學位類別: 碩士
Master
系所名稱: 醫學院 - 藥理學研究所
Department of Pharmacology
論文出版年: 2021
畢業學年度: 109
語文別: 英文
論文頁數: 47
中文關鍵詞: USP24藥物抗藥性USP24 抑制劑ABC 轉運蛋白
外文關鍵詞: lung cancer, drug resistance, USP24 inhibitor, ABC transporter
相關次數: 點閱:101下載:0
分享至:
查詢本校圖書館目錄 查詢臺灣博碩士論文知識加值系統 勘誤回報
  • 藥物抗藥性仍然是癌症治療期間非常重要的一個問題。有許多的原因導致藥物的抗藥性發生包括藥物泵出細胞、基因異質性等等。一些蛋白質:E1/E2/E3 和去泛素蛋白酶們皆有參與在各種生理疾病理條件下蛋白質的泛素化來調控目標蛋白的功能及目標蛋白的降解。我們實驗室之前的研究裡已經發現了 USP24 可以透過調降 Rad51 的表現來誘導基因的不穩定性,從而提高腫瘤突變負荷和癌幹特性。更進一步地,我們也發現USP24 可以穩定 ABCG2 轉運蛋白、P-gp 和 ABCG2 的表現導致化療藥物有更高的機會泵出癌細胞外。此研究當中,首先,我們透過基於結構的策略篩選出特定的 USP24 抑制劑。有幾種 USP24 抑制劑已經被測試並驗證了他們對於肺腺癌細胞 A549 和經由紫杉醇所誘導的已產生抗藥性的A549 細胞:A549-T24 細胞的作用,在這些抑制劑之中發現 USP24i-397和其類似物 USP24i-A 被證實為目前為止阻斷藥物抗性最有效果的化合物。接著我們研究了 USP24 抑制劑阻斷藥物抗性的分子機制從而發現了USP24 抑制劑能夠降低 ABCG2 的表現量,也發現這抑制劑能調降與癌幹特性相關的蛋白標記物表現量。最後我們也使用 RNA-NGS 大數據分析 USP24-i-a 影響基因表現的狀況。其中和代謝級固醇類合成的相關基因備高度誘發。以上這些綜觀來看,USP24 抑制劑確實能夠阻斷藥物抗性。
    尚有一些實驗像是動物實驗還有化合物優化的實驗在未來還需要再進行。
    希望我們的化合物 USP24-i 能在未來發展成為臨床用藥,阻斷或延緩癌症治療過程中抗藥性的發生。



    關鍵字:USP24、藥物抗藥性、USP24 抑制劑、ABC 轉運蛋白

    Drug resistance has remained an important issue during cancer therapy.
    Various reasons including drug pump out and heterogeneity contribute to drug resistance during cancer therapy. Several proteins including E1/E2/E3 and deubiquitinases are involved in protein ubiquitination to regulate the function and degradation of target proteins in various physiological and pathological conditions. Our previous studies revealed that USP24 can induce genomic instability through a decrease in Rad51 expression, thereby enhance the tumor mutation burden (TMB) and cancer stemness. Furthermore, we also found that USP24 can stabilize ABCs transporters, P-gp and ABCG2, resulted in the chemotherapeutic drug, paclitaxel, pump out cancer cells. In this study, at first, we tried to screen specific USP24 inhibitors by structure-based strategy.
    Several USP24 inhibitors have been probed and then validated their effects on A549, and Taxol-induced drug-resistant A549-T24 cell, USP24i-397, and its analog, USP24i-A, were proved to be the most efficacy in blocking drug resistance. To study the molecular mechanism of how USP24 inhibitors block drug resistance, we found that USP24 inhibitors decreased the level of ABC transporters and cancer stemness-related markers, subsequently inhibited drug resistance. Finally, we also used RNA-NGS to study the global gene expression profile under USP24-i-a treated A549-T24 lung cancer cells. Many metabolisms and steroid synthesis-related genes were upregulated. Taken together, USP24i is indeed working on blocking drug resistance. Several experiments such as animal experiments and compound optimization need to be performed in the future. Hope our compound, USP24-i, can be developed as a clinical-used drug to block or delay the occurrence of drug resistance during cancer therapy in the future.

    Key words: lung cancer, drug resistance, USP24 inhibitor, ABC transporter.

    INTRODUCTION .................................................................................. 1 I. Lung cancer ...................................................................................... 1 Epidemiology and mortality of lung cancer ........................................... 1 Drug Resistance in lung cancer .............................................................. 1 II. Ubiquitination and deubiquitination ............................................. 2 Deubiquitinating enzymes (DUBs) ......................................................... 3 III. Ubiquitin-specific protease 24, USP24 ........................................... 4 IV. P-glycoprotein (P-gp) as the cancer-resistant means ................... 5 V. Cancer stem cell (CSC).................................................................... 6 CD44 ....................................................................................................... 6 STUDY BASIS AND SPECIFIC AIMS ................................................ 7 MATERIALS AND METHODS ........................................................... 8 1. Cell lines and culture condition ...................................................... 8 2. Lentivirus knockdown system ........................................................ 8 3. Cell viability assay ........................................................................... 9 4. LC-MS/MS ....................................................................................... 9 5. Annexin V/PI double-staining assay ............................................ 10 6. Western blot .................................................................................... 10 7. Statistical analysis .......................................................................... 11 RESULTS ............................................................................................... 12 The effects of USP24 similar compounds on Taxol-induced cytotoxicity of lung cancer drug-resistant cells provides critical information for the optimization of USP24i ............................................................................ 12 Optimization of USP24i (NCI677397) .................................................... 12 The combination treatment of Paclitaxel (Taxol) and USP24 inhibitors increases the cytotoxicity of lung cancer drug-resistant cells .............. 13 USP24 affect the chemo-drug retention of resistant A549-T24 cancer cell .............................................................................................................. 14 The ABC transporter P-glycoprotein (P-gp) is the substrate of USP24 in lung cancer cells.................................................................................... 15 Globally studies the gene expression repertoires of USP24 inhibitors in A549-T24 cells ........................................................................................... 17 DISCUSSION ........................................................................................ 18 USP24 in cancer therapy ......................................................................... 18 I. Reversed the resistant properties by inhibiting USP24 protein functions. ................................................................................................... 20 Drug effluxes pump pumps out of the chemo-drugs. ........................... 21 Cancer stemness .................................................................................... 21 II. The gene expressed of administrated by USP24 inhibitors. ...... 22 III. Conclusion and perspectives ......................................................... 23 REFERENCES...................................................................................... 24 TABLES ................................................................................................. 28 FIGURES ............................................................................................... 32

    Amerik, A. Y., & Hochstrasser, M. (2004). Mechanism and function of deubiquitinating enzymes. Biochim Biophys Acta, 1695(1-3), 189-207. doi:10.1016/j.bbamcr.2004.10.003
    Arnal, M., Franco, N., Fargeot, P., Riedinger, J. M., Brunet-Lecomte, P., & Lizard-Nacol, S. (2000). Enhancement of mdr1 gene expression in normal tissue adjacent to advanced breast cancer. Breast Cancer Res Treat, 61(1), 13-20. doi:10.1023/a:1006449931921
    Bhattacharya, S., Chakraborty, D., Basu, M., & Ghosh, M. K. (2018). Emerging insights into HAUSP (USP7) in physiology, cancer and other diseases. Signal Transduction and Targeted Therapy, 3(1). doi:10.1038/s41392-018-0012-y
    Haas, A. L., & Bright, P. M. (1987). The dynamics of ubiquitin pools within cultured human lung fibroblasts. Journal of Biological Chemistry, 262(1), 345-351. doi:10.1016/s0021-9258(19)75933-x
    Hanpude, P., Bhattacharya, S., Dey, A. K., & Maiti, T. K. (2015). Deubiquitinating enzymes in cellular signaling and disease regulation. IUBMB Life, 67(7), 544-555. doi:10.1002/iub.1402
    Hu, M., Li, P., Li, M., Li, W., Yao, T., Wu, J. W., . . . Shi, Y. (2002). Crystal structure of a
    UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde. Cell, 111(7), 1041-1054. doi:10.1016/s0092-8674(02)01199-6
    Lam, Y. A., Xu, W., Demartino, G. N., & Cohen, R. E. (1997). Editing of ubiquitin conjugates by an isopeptidase in the 26S proteasome. Nature, 385(6618), 737-740. doi:10.1038/385737a0
    LeadIT, B. (2019). http://www.biosolveit. de/LeadIT. accessed 12th Jan.
    Lim, K.-H., Joo, J.-Y., & Baek, K.-H. (2020). The potential roles of deubiquitinating enzymes in brain diseases. Ageing Research Reviews, 61, 101088. doi:10.1016/j.arr.2020.101088
    Mansoori, B., Mohammadi, A., Davudian, S., Shirjang, S., & Baradaran, B. (2017). The Different Mechanisms of Cancer Drug Resistance: A Brief Review. Advanced Pharmaceutical Bulletin, 7(3), 339-348. doi:10.15171/apb.2017.041
    Miranda, A., Hamilton, P. T., Zhang, A. W., Pattnaik, S., Becht, E., Mezheyeuski, A., . . . Nelson, B. H. (2019). Cancer stemness, intratumoral heterogeneity, and immune response across cancers. Proc Natl Acad Sci U S A, 116(18), 9020-9029. doi:10.1073/pnas.1818210116
    Onno, M., Nakamura, T., Mariage-Samson, R., Hillova, J., & Hill, M. (1993). Human TRE17 an oncogene is generated from a family of homologous polymorphic sequences by single-base changes. DNA Cell Biol, 12(2), 107-118. doi:10.1089/dna.1993.12.107
    Peterson, L. F., Sun, H., Liu, Y., Potu, H., Kandarpa, M., Ermann, M., . . . Donato, N. J.
    (2015). Targeting deubiquitinase activity with a novel small-molecule inhibitor as therapy for B-cell malignancies. Blood, 125(23), 3588-3597. doi:10.1182/blood2014-10-605584
    Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., & Ferrin, T. E. (2004). UCSF Chimera--a visualization system for exploratory research and analysis. J Comput Chem, 25(13), 1605-1612. doi:10.1002/jcc.20084
    Sheng, Y., Saridakis, V., Sarkari, F., Duan, S., Wu, T., Arrowsmith, C. H., & Frappier, L. (2006). Molecular recognition of p53 and MDM2 by USP7/HAUSP. Nat Struct Mol Biol, 13(3), 285-291. doi:10.1038/nsmb1067
    Silva, R., Vilas-Boas, V., Carmo, H., Dinis-Oliveira, R. J., Carvalho, F., de Lourdes Bastos,M., & Remião, F. (2015). Modulation of P-glycoprotein efflux pump: induction and activation as a therapeutic strategy. Pharmacol Ther, 149, 1-23. doi:10.1016/j.pharmthera.2014.11.013
    Singhal, S., Taylor, M. C., & Baker, R. T. (2008). Deubiquitylating enzymes and disease. BMC Biochemistry, 9(Suppl 1), S3. doi:10.1186/1471-2091-9-s1-s3
    Sung, H., Ferlay, J., Siegel, R. L., Laversanne, M., Soerjomataram, I., Jemal, A., & Bray, F. (2021). Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries. CA Cancer J Clin, 71(3), 209-249. doi:10.3322/caac.21660
    Thapa, R., & Wilson, G. D. (2016). The Importance of CD44 as a Stem Cell Biomarker and Therapeutic Target in Cancer. Stem Cells International, 2016, 1-15. doi:10.1155/2016/2087204
    Uramoto, H., & Tanaka, F. (2014). Recurrence after surgery in patients with NSCLC. Transl Lung Cancer Res, 3(4), 242-249. doi:10.3978/j.issn.2218-6751.2013.12.05
    Wang, L., Zuo, X., Xie, K., & Wei, D. (2018). The Role of CD44 and Cancer Stem Cells. Methods Mol Biol, 1692, 31-42. doi:10.1007/978-1-4939-7401-6_3
    Wang, S. A., Wang, Y. C., Chuang, Y. P., Huang, Y. H., Su, W. C., Chang, W. C., & Hung, J. J. (2017). EGF-mediated inhibition of ubiquitin-specific peptidase 24 expression has a crucial role in tumorigenesis. Oncogene, 36(21), 2930-2945. doi:10.1038/onc.2016.445
    Wang, Y. C., Wang, S. A., Chen, P. H., Hsu, T. I., Yang, W. B., Chuang, Y. P., . . . Hung, J. J. (2016). Variants of ubiquitin-specific peptidase 24 play a crucial role in lung cancer malignancy. Oncogene, 35(28), 3669-3680. doi:10.1038/onc.2015.432
    Wang, Y. C., Wu, Y. S., Hung, C. Y., Wang, S. A., Young, M. J., Hsu, T. I., & Hung, J. J. (2018). USP24 induces IL-6 in tumor-associated microenvironment by stabilizing p300 and β-TrCP and promotes cancer malignancy. Nat Commun, 9(1), 3996. doi:10.1038/s41467-018-06178-1
    Webb, B., & Sali, A. (2017). Protein Structure Modeling with MODELLER. Methods Mol Biol, 1654, 39-54. doi:10.1007/978-1-4939-7231-9_4
    Wu, Y. R., Chen, C. M., Chen, Y. C., Chao, C. Y., Ro, L. S., Fung, H. C., . . . Lee-Chen, G. J. (2010). Ubiquitin specific proteases USP24 and USP40 and ubiquitin thiolesterase UCHL1 polymorphisms have synergic effect on the risk of Parkinson's disease among Taiwanese. Clin Chim Acta, 411(13-14), 955-958. doi:10.1016/j.cca.2010.03.013
    Yu, H., Pak, H., Hammond-Martel, I., Ghram, M., Rodrigue, A., Daou, S., . . . Affar el, B. (2014). Tumor suppressor and deubiquitinase BAP1 promotes DNA double-strand break repair. Proc Natl Acad Sci U S A, 111(1), 285-290.
    doi:10.1073/pnas.1309085110
    Zhang, L., Lubin, A., Chen, H., Sun, Z., & Gong, F. (2012). The deubiquitinating protein USP24 interacts with DDB2 and regulates DDB2 stability. Cell Cycle, 11(23), 4378-4384. doi:10.4161/cc.22688
    Zimmermann, F. B., Molls, M., & Jeremic, B. (2003). Treatment of recurrent disease in lung cancer. Semin Surg Oncol, 21(2), 122-127. doi:10.1002/ssu.10029

    無法下載圖示 校內:2026-08-22公開
    校外:2026-08-22公開
    電子論文尚未授權公開,紙本請查館藏目錄
    QR CODE