| 研究生: |
吳仁煌 Wu, Ren-Huang |
|---|---|
| 論文名稱: |
應用乳糖操縱子-抑制子調控系統建立可誘發性之核糖核酸干擾術 Establishment of an effectively lac operator- repressor based inducible RNAi system in mammalian cells |
| 指導教授: |
張文粲
Chang, Wen-Tsan |
| 學位類別: |
碩士 Master |
| 系所名稱: |
醫學院 - 生物化學研究所 Department of Biochemistry |
| 論文出版年: | 2004 |
| 畢業學年度: | 92 |
| 語文別: | 中文 |
| 論文頁數: | 105 |
| 中文關鍵詞: | 酸干擾術 、第三型RNA聚合酶 、可誘發性之核糖核酸干擾術 、乳糖操縱組 |
| 外文關鍵詞: | inducible RNAi system, lac operon, RNAi, RNA polymerase III |
| 相關次數: | 點閱:74 下載:2 |
| 分享至: |
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小干擾型RNA(small interfering RNAs, siRNAs)所引發的RNA干擾現象(RNA interference, RNAi),能夠具有專一性的沉默目標mRNA。然而,利用RNAi的技術,降低對細胞所必需基因的表現,可能會導致細胞停止生長或細胞死亡。由於這些因素,使得RNAi的應用受到限制,包括對於基因功能上的長期研究。而一個可誘發的RNAi表現系統,將可以克服這些限制。當我們能夠嚴謹的調控shRNA產生時,將有助於研究當破壞細胞某些重要基因時,是否會造成明顯的表現型,尤其是在細胞發育或細胞分化時期。因此,我們設計一種可誘發的shRNAs表現系統,而藉著RNAi的作用,可以讓我們控制特定基因之表現。首先,我們構築數種以人類H1起動子為骨架的質體,並且在起動子內外放置操縱子序列,而這些操縱子序列是來自大腸桿菌乳糖操縱組(lac operon)。在這個可誘發的shRNAs表現系統中,當沒有IPTG存在時,乳糖抑制子會結合到起動子上的操縱子序列,藉此阻礙起動子進行轉錄作用。此外,我們也將操縱子序列構築於起動子的不同位置,以測試何種組合的調控能力最佳。而在實驗中,我們以luciferase基因和p53基因當做目標基因,以測試系統的沉默效率。結果發現:當我們未加入IPTG時,實驗組的目標基因表現量為對照組的60%;處理IPTG後,目標基因的表現量降到5%。因此,乳糖抑制子的確會結合到操縱子序列,藉此阻礙起動子進行轉錄作用,而且誘發反應可被IPTG調控。但是,在我們的系統中,卻有高背景值的問題,代表即使沒有IPTG存在,仍然會降低目標基因的表現。為了改善背景值的問題,我們設計另一種可誘發的的siRNAs表現系統,此系統是以兩個修飾過的起動子為基礎,並且各自轉錄正義股RNA與反義股RNA,最後形成siRNAs。經過測試,在這個系統中,當沒有IPTG存在時,乳糖抑制子會結合到起動子上的操縱子序列,並且阻礙起動子進行轉錄作用,無法產生siRNAs,使得目標基因的表現完全正常;處理IPTG之後,目標基因的表現量降到剩15%。接著,我們以幼倉鼠腎細胞(BHK cell)為研究模型,成功的證明可誘發的siRNAs表現系統的調控能力。總而言之,我們所設計的可誘發的RNAi表現系統,可以廣泛的應用在對於基因功能或治療應用之基礎研究。
RNA interference (RNAi) is mediated by small interfering RNAs that target and degrade mRNA in a sequence-specific manner. However, the down-regulation of essential genes by RNAi will result in an arrest of cell growth or in cell death, thus imposing significant limitations on the applications of RNAi to long-term studies on the function of these genes. Availability of an inducible RNAi system will overcome this limitation. The controlled expression of short hairpin RNAs (shRNAs) molecules in a temporal and spatial manner would be bentifical for studying loss-of-function phenotypes in the context of cellular development and differentiation. Here, we describe an inducible small interfering RNAs (siRNAs) expression system that allows a significant control of the specific gene silencing by RNAi. First, we generated several constructs composed of the human H1 promoter and operator sequence derived from the Escherichia coli lac operator-repressor system. In this inducible RNAi system, lac repressor would bind to operator in the absence of isopropyl-β-D-1- thiogalactoside (IPTG) to repress gene expression and lac operator in these constructs was varied to determine the most effective combination for optimal repression/induction. In addition, we used the firefly luciferase reporter gene and p53 gene as the target to determine the efficiency of our inducible RNAi system. The activity of luciferase reporter was reduced by 40% in the absence of IPTG and reduced by 95% after IPTG treatment. Therefore, the lac repressor could bind to operator sequence and inhibited the expression of shRNAs transcripted by modified H1 promoter. Although these constructs could mediate lac repressor and IPTG regulation to a certain extent, significant levels of background expression of shRNA were observed in these constructs. To overcome the observed leaky expression from these constructs, we generated tandem-type siRNA expression constructs composed of the modified H1 promoter. These constructs showed the features of tight repression of transcription in the absence of IPTG and the rapid induction of transcription on addition of IPTG. Using this system, we demonstrated the inducible RNAi effect on the gene expression in Baby Hamster Kidney cell (BHK-21). In summary, our inducible RNAi system should be useful both for basic researches on gene function and therapeutic applications.
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